Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g02080 ATGGAGATAGAGCAAGATATTACTAGGGATGGTGTTGCAAAAAACAATGAAATGATGAGAGGTTCAAAAATAATTAGAGGGATGCATCTTGTGTGGGAAGATTTGAGTGTTGTAATTCCAAATTTTGGTAATGGACACACAAGAAGATTGTTGAATGGTTTGAGTGGATATGCTGAACCTAATAGAATCATGGCTATTATGGGTCCATCTGGCTCTGGAAAATCTACTCTTCTTGATGCTTTGGCAGGTAGACTCTCTGGAAATGTTATCATGTCTGGAAATGTGCTTTTAAACGGAAAGAAAAGGAGATTAGACCATGGGGTTGTAGCTTATGTGACTCAAGAAGACATATTGTTGGGAACACTAACAGTTAGAGAGACAATATCTTACTCGGCAAATTTAAGGCTTCCAAGCAGCATGACAAAAGAAGAGGTAAATGACATTGTAGAGGGAACAATTATAGAAATGGGTCTTCAAGATTGTGGTGATAGGCTTATAGGTAATTGGCACTTAAGAGGTATAAGTGGTGGAGAAAAGAAAAGACTAAGCATAGCACTTGAAATCCTAACAAGGCCTTGTCTCTTGTTCCTTGATGAACCTACTAGTGGTTTGGACAGTGCCTCAGCTTATTTTGTTGCTCAAACATTGAGAAACATAGCTCATGATGGGAAGACTGTTATTTCTTCTATTCATCAACCAAGTAGTGAGGTTTTTGCACTCTTTGATGATCTCTTTCTACTTTCTGGGGGTCAAACAATTTACTTTGGACAAGCTGAAAAGGCTGTTGAGTTCTTTGGCAAAGCAGGATTCCCATGTCCAAGTAGAAGAAACCCTTCTGATCATTTCCTTCGTTGTATTAATTCAGACTTTGACACTATCACAACCACTATGATGGCCTCCAGAAGAACACATGAACCAAAAACATTAGCACCATCAACAATGAACTTATCAACAGCAGCAACCAAAGCAATACTAATAGATAAATACCGTTGGTCAGAATATGCAACTTATGCAAGAGCAAGAATCAAAGAAATCTCAAATTTTGAAGGACATGAATGTGAAACTAAAAGCAAGAGCCAAGCCAAATGGTGGAAGCAACTATCAACTTTGACTCATAGATCTTTTGTGAACATGTCTAGAGATGTAGGATACTACTGGATAAGGATAACAATCTATGTTGCCTTATCTTTGTGTGTTGGAACCATCTTTTTTGAAGTTGGATCAAGTTATAGAGCCATTTTCGCAAGAGGAGCATGCGGCGCTTTTATATCAGGTTTCATGACATTCATGTCCATAGGAGGCTTCCCATCATTCATAGAGGAAATGAAGGTCTTCTACAAAGAAAGGCTCAATGGATATTATGGAATAGCAGTCTACATTCTGTCAAATTTTCTGTCTTCTTTTCCTTTTGTAGCAGTGATGTCAATTGCTACTGGGACTATAACATATTATATGGTTAAGTTTCGCCCTGAGTTTTCGCATCTTTTGTATATCTGTTTGGATCTATTGAGCTGTATCGCGGTTGTGGAGAGCTCAATGATGATTATAGCTGCATTGGTTCCCAATTTCCTGATGGGATTGGTAATAGGAGCAGGATATATTGGTCTTATGATGATGACTGCTGGGTATTTCCGGCAGATCCGTGATCTTCCCAAATTCTTCTGGCGTTACCCGATTTCATACATCAATTATGGTGCATGGGGATTGCAGGGAGCTTTCAAGAATGACATGATAGGGATGGAGTTTGATCCTTTGACACCTGGTGGACCAAAACTGAAAGGAGAAATAATCCTCACAACAATGCTTGGAATGAAAGTTGATTATTCAAAATGGTGGGACCTAGCTGTGGTCATCTTCATCCTCATGTTGCTTAGAGTTATTTTCTTTTTCATTCTCAAATTTAAGGAGAGTGCTGTACCTTTCCTTCACAGTATCTACACAAAGCAAACACTGCAACGTATCATGAAGCGTCCTTCCTTTAGGAAAACACCATCGTTCGCTTCCAAGAGACACCAACCACTGCATCCATTGTCTTCTCAAGAGGGTTTCAACTCTCCATGTCATTAG 2067 0.3914 MEIEQDITRDGVAKNNEMMRGSKIIRGMHLVWEDLSVVIPNFGNGHTRRLLNGLSGYAEPNRIMAIMGPSGSGKSTLLDALAGRLSGNVIMSGNVLLNGKKRRLDHGVVAYVTQEDILLGTLTVRETISYSANLRLPSSMTKEEVNDIVEGTIIEMGLQDCGDRLIGNWHLRGISGGEKKRLSIALEILTRPCLLFLDEPTSGLDSASAYFVAQTLRNIAHDGKTVISSIHQPSSEVFALFDDLFLLSGGQTIYFGQAEKAVEFFGKAGFPCPSRRNPSDHFLRCINSDFDTITTTMMASRRTHEPKTLAPSTMNLSTAATKAILIDKYRWSEYATYARARIKEISNFEGHECETKSKSQAKWWKQLSTLTHRSFVNMSRDVGYYWIRITIYVALSLCVGTIFFEVGSSYRAIFARGACGAFISGFMTFMSIGGFPSFIEEMKVFYKERLNGYYGIAVYILSNFLSSFPFVAVMSIATGTITYYMVKFRPEFSHLLYICLDLLSCIAVVESSMMIIAALVPNFLMGLVIGAGYIGLMMMTAGYFRQIRDLPKFFWRYPISYINYGAWGLQGAFKNDMIGMEFDPLTPGGPKLKGEIILTTMLGMKVDYSKWWDLAVVIFILMLLRVIFFFILKFKESAVPFLHSIYTKQTLQRIMKRPSFRKTPSFASKRHQPLHPLSSQEGFNSPCH 688
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g02080 688 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 30 274 IPR003439 GO:0005524
Car06g02080 688 CDD ABCG_EPDR 27 256 - -
Car06g02080 688 MobiDBLite consensus disorder prediction 664 688 - -
Car06g02080 688 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 30 271 IPR027417 -
Car06g02080 688 MobiDBLite consensus disorder prediction 672 688 - -
Car06g02080 688 ProSitePatterns ABC transporters family signature. 174 188 IPR017871 GO:0005524
Car06g02080 688 PANTHER ABC TRANSPORTER G FAMILY MEMBER 13 26 683 - -
Car06g02080 688 Pfam ABC-2 type transporter 366 574 IPR013525 GO:0016020|GO:0140359
Car06g02080 688 Gene3D - 26 268 IPR027417 -
Car06g02080 688 Pfam ABC transporter 51 202 IPR003439 GO:0005524
Car06g02080 688 SMART AAA_5 60 259 IPR003593 -
Car06g02080 688 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 26 683 - -
Car06g02080 688 Pfam ABC-2 type transporter 231 290 IPR043926 GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g02080 Car-Chr6 21147302 21156004 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g02080 49 245 Calmodulin-binding Proteins AT2G36910 30.275 9.21e-13 70.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g02080 K05681 - gmx:100788651 1170.61