Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g02059 ATGAAGAAGCTCCGCCGCCAAAACAACCGCGGAGTGGAAAGTGAGAAGGAGAATATGAGCGAGGGTATAACACAGCCGCAACGCACTTGGGTTAGGGTAGAAAATCAGCGTCTTGCCCTTGTTTACCAGGATACAAACCCCGAACCGGAGCTACCCAAGGTTCCACCCACCGAAGTTAGTTTCTCCAATCCATTCGGTTCAACAAAACCCCACACCTTTCTCCTCCAAATTTCGAGAAAAATGATGAGGCTGCAGACATATGCCGGTCTTAGTTTAATTGCCACTTTGGCTCTTACATATCATGCATTTAACAGTAGAAGCCAGTTTTATCCAGCAATGGTTTATTTGGCAACTTCCAAGATCAGTTTGGTGCTTCTTCTCAACATGGGTTTGGTTATCATGTGTGTTTTATGGCAGTTAACCAAAAAGTTGTTTCTTGGTTCACTCCGTGAAGCCGAGGTTGAGAGGCTTAATGAGCAATCGTGGAGGGAGGTTATGGAAATCCTCTTTGCAATTACTATCTTTAGGCAGGACTTCTCTATTACATTCCTTACTATGGTTACAGCATTATTGTTGATTAAGGCTTTGCATTGGTTGGCTCAGAAAAGAGTAGAGTATATAGAGACTACACCTTCTGTGTCTGTGTTGTCTCAAGTTCGAATAGTTTCTTTTATGGGTTTCCTTCTTCTTCTGGATGGTATATTTTTGTATAGTTCATTGAAGCATTTACTTGTCACACAGCAGGCGTCGGTTTCACTCTTCTTTGCTTTCGAGTACATGATATTGGCAACAACAACGGTGTCAATTTTTGTAAAATATATTTTCTATGTCAGTGACATGCTTATGGAGGGACAGTGGGAAAGGAAACCAGTCTTCACGTTTTACTTGGAACTTGTCAGGGACTTGCTTCACTTGTCTATGTATCTGTGCTTCTTTCTTGCAATTTTCATAAATTATGGCGTTCCTTTGCATTTAATAAGGGAGCTCTATGAGACATTTAGGAACTTCAAAATTCGTATTACAGATTACATACGTTATCGTAAGGTCACTTCTAACATGAATGACTGGTTTCCAGATGCAACCACCGAAGAGATCAATGCAAATGACGCAACCTGCATCATCTGTCGTGAAGAGATGACTACTGCGAAGAAACTCAGATGTGGTCATTTTTTTCATGTTCATTGTCTCCGATCATGGCTGGAGCGGCAGCATACTTGCCCTACCTGCAGAGCACTGGTTGTCCCATCAGAAAATGGGACAACTTCTGCTGAGGGGCAGCAAAGATCACAGTCAGATGCTCATGGTAATCATATGATAAACAACTACTATTGGTGA 1335 0.4195 MKKLRRQNNRGVESEKENMSEGITQPQRTWVRVENQRLALVYQDTNPEPELPKVPPTEVSFSNPFGSTKPHTFLLQISRKMMRLQTYAGLSLIATLALTYHAFNSRSQFYPAMVYLATSKISLVLLLNMGLVIMCVLWQLTKKLFLGSLREAEVERLNEQSWREVMEILFAITIFRQDFSITFLTMVTALLLIKALHWLAQKRVEYIETTPSVSVLSQVRIVSFMGFLLLLDGIFLYSSLKHLLVTQQASVSLFFAFEYMILATTTVSIFVKYIFYVSDMLMEGQWERKPVFTFYLELVRDLLHLSMYLCFFLAIFINYGVPLHLIRELYETFRNFKIRITDYIRYRKVTSNMNDWFPDATTEEINANDATCIICREEMTTAKKLRCGHFFHVHCLRSWLERQHTCPTCRALVVPSENGTTSAEGQQRSQSDAHGNHMINNYYW 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g02059 444 Pfam Ring finger domain 371 410 IPR001841 -
Car06g02059 444 MobiDBLite consensus disorder prediction 1 26 - -
Car06g02059 444 SUPERFAMILY RING/U-box 352 416 - -
Car06g02059 444 PANTHER RING ZINC FINGER PROTEIN 81 426 - -
Car06g02059 444 CDD RING-H2_synoviolin 369 410 - -
Car06g02059 444 ProSiteProfiles Zinc finger RING-type profile. 372 410 IPR001841 -
Car06g02059 444 PANTHER - 81 426 - -
Car06g02059 444 SMART ring_2 372 409 IPR001841 -
Car06g02059 444 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 344 420 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g02059 Car-Chr6 20506445 20517075 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g02059 81 441 C3H Transcription Factor Family AT3G16090 76.796 0.0 592
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g02059 K10601 - gmx:100782356 646.736
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g02059 06 20506445 20517075 Car06g02059 06 20506445 20517075 ECH