Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g02057 ATGGCTTATATGTGTGCAGACAGTGGTAACCTAATGGCAATTGCTcaacaagtcatcaaccaaaaacagcaacaagaacaagaacaacaacaacaaaacaacCTCTTAGCTACTACTTTAACTACCAACCCTCTCTCTCTCCATCATCCATGGAACAACACTCCACTAATAGTAACATCATCACTACCACCTTTCACCGACTTCACCGACCCATTTCATGTCGCCTCGGGTCCCGATCCATCTTTCCATTTCCCTCCCCTCGACCCTCACTCCACCACCTTCAGATTCTCCGATTTCGATTCCGACGACTGGATGGACACCTTAATGGCCGCCGCCGATACTCAACACTCCGATTTTCAACTCAACCCGTTTTCTTCTTGCCCGACCCGACTCTCCCCACCTCCGGATCTTAACCGGGTCATCTTCTCAGATTCCCAATCCCCAACAATCCCACTTCAACCTCCCACTTTAACCAAAAACGACACAAACACCGAAACGACGTCGTCGTTTTCATCCTCTCCAAACCCGATTCTAAAAACCCTAACCGAATGCGCCACTTTAATCGAAACCGAACCGAATCGCGCCATCGAAACCCTAACCAATCTCAAAAACTCAATTTCACAAAACGGAACCCCAATTCAACGAGTCTCTTTCTACTTCTCACAAGCTTTAACCAACAAAGTAACCGCTCAAGGAGAATCAACTTCTTCAATTTCAACAACATGGGAAGAATTAACACTCTCTTACAAAGCCCTAAACGACGCGTGTCCTTATTCAAAATTCGCACATTTAACCGCAAACCAAGCGATTCTCGAAGCAACTGAAGGATTCACAAATATTCACATCGTTGATTTTGGAATTGTTCAAGGGATTCAATGGGCTGCATTATTACAAGCATTTGCAACTCGTTCTTCAGGTAAACCTAATAGTGTAAGAATTTCTGGAATTCCTGCTATGGCACTTGGAATTTCACCCGTTTCTTCTCTTACTGCTACTGGTAATCGTTTATCTGAATTTGCGAAGCTTTTAGGGTTGAATTTTGAGTTTACACCGATTCTTACACCTATTCAGCTTCTTAATGAAACTAGCTTTTGCATTCAACCAAACGAAGCTTTAGCTGTTAATTTCATGCTTCAGTTGTATAATCTTTTGGATGAAACTATGGATGCTGTCGAAACAGCGCTTCGCTTGGCGAAATCGTTGAACCCTAAGATTGTTACTCTTGGTGAGTATGAAGCTAGCTTGACGTCTCGCGTTGGTTTTGTTAAGCGGTTTAATACTGCTTTTAATTATTTTGCTGCTTTTTTTGAGTCTTTGGAGCCGAATATGGCGTTTGATTCGCCGGAGAGGTTTCAGGTCGAAAGTCTTTTGCTTGGAAGGAGAATTGATGGTGTGATTGGTGTGAGGGAGAGGATGGAGGATAAAGAACGATGGAAAGTTTTGATGGAAAGTTGTGGTTTTGAATCTGTGAGTTTGAGCCATTATGCAACTAGTCAAGCTAAGATATTGTTGTGGAATTATAGTTATGGTTCTTTGTATTCTCTTGTTGAATCTCAACCTGGGTTTTTGTCTTTGGCTTGGAAAGATGTTCCTTTGTTGACTGTTTCTTCTTGGCGTTGA 1620 0.4111 MAYMCADSGNLMAIAQQVINQKQQQEQEQQQQNNLLATTLTTNPLSLHHPWNNTPLIVTSSLPPFTDFTDPFHVASGPDPSFHFPPLDPHSTTFRFSDFDSDDWMDTLMAAADTQHSDFQLNPFSSCPTRLSPPPDLNRVIFSDSQSPTIPLQPPTLTKNDTNTETTSSFSSSPNPILKTLTECATLIETEPNRAIETLTNLKNSISQNGTPIQRVSFYFSQALTNKVTAQGESTSSISTTWEELTLSYKALNDACPYSKFAHLTANQAILEATEGFTNIHIVDFGIVQGIQWAALLQAFATRSSGKPNSVRISGIPAMALGISPVSSLTATGNRLSEFAKLLGLNFEFTPILTPIQLLNETSFCIQPNEALAVNFMLQLYNLLDETMDAVETALRLAKSLNPKIVTLGEYEASLTSRVGFVKRFNTAFNYFAAFFESLEPNMAFDSPERFQVESLLLGRRIDGVIGVRERMEDKERWKVLMESCGFESVSLSHYATSQAKILLWNYSYGSLYSLVESQPGFLSLAWKDVPLLTVSSWR 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g02057 539 Pfam GRAS domain family 179 539 IPR005202 -
Car06g02057 539 ProSiteProfiles GRAS family profile. 168 539 IPR005202 -
Car06g02057 539 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 178 538 IPR005202 -
Car06g02057 539 PANTHER SCARECROW-LIKE PROTEIN 4-RELATED 178 538 - -
Car06g02057 539 Coils Coil 12 35 - -
Car06g02057 539 MobiDBLite consensus disorder prediction 143 174 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g02057 Car-Chr6 20491081 20493720 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g02057 1 539 GRAS Transcription Factor Family AT5G66770 55.668 0.0 551
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Car06g02057 GRAS 2e-101 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g02057 - - adu:107477343 654.44