Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g02045 ATGCTTCTCATATTTCTATCAACATTAATTCTCTATTTTCTTCTTTCAAGATTCACTTTCACAAAAAATTCAAAAATAAAGCTTCCACCAGGACCAACTCCTCTTCCTTTCATAGGCAACCTCCTTGAATTAGGAAAAAAGCCACACCAATCTTTGACCAATTTAGCTAAAATTTATGGTCCAATAATGAGTCTTAAATTTGGCCAAGTAACAACTATAGTTGTTTCATCACCCAACATGGCCAAAGAAATACTCCAAACCCATGATCAATTATTATCTGACAGAGCAATTCCCAATAGTATTGAAGTTCATGATCATCACAAACATAGCATGACATTCTTACCTATCTCACCTCTTTGGAGAGAACTAAAAAAAATATGCAACAATCAATTATTCTCTAACAAGACTCTTGATGAGACTAGAAAACTTAGGCAACAAAAACTAGAAGAAATTCTCAATGATATTCATCAAAGTAGCCTTAATAATGAAGCTGTTGATATTGGAAAATTGGCTTTTAAGACATCAATTAATTTGTTGTCAAATACTATTTTCTCTTTAGATTTGGTTCATTCTAATGATGCAGTTGGAGATTTTAAGGAGCTTGTTATGAATATAATGAAAGAAAGTGGAAACCCAAATATTGTTGACTTTTTTCCTGTAATGAAGATTTTTAACCTTGATATACAGGGTATTTATAGTCGTAATGCTGTTTATGCTGGAAAGATTATTGATATCTTTAAAGATTTGATTGATCAACGGTTGAAGCTGAGGGAAGTACAAGGTTTCGACTCAAATAGTGACATGCTAAATACCTTGCTCAACATTGCTCAAAATAATAGCAAAGAGATGAACAGAAATCAAATCCAACATTTATTTCTGACTTTATTTGTTGCGGGAACAGAGACAATTTCATCTACAATAGAATGGGCAATGGCAGAATTACTTAAAAATGAAGAAGTTATGTCAAAAGCAAAACAAGAATTGGAACAGATAATTGGCAAAAACAAACTAGTAGAGGAATCAGATATTACTAGACTTCCTTATTTACAAGCAATAATAAAAGAGACTTTTCGATTACATCCTCCAGTTCCATTTTTAATCCCTCGAAAATCAAATGAAAATGTGGAAATTTGTGGGTACACAATCCCAAAAGGTGCACATGTGTTGGTCAATGTGTGGGCTATTGGAAGAAATTCAAGTATTTGGGAAAATGTAAATTTATTTTCACCATTCTTAACATCGGAAATTGATGTTAAAGGTCACAATTTCGAGCTTACACCCTTTGGTGCTGGGAAGAGAATTTGTCCTGCCTTGCCAATAGCTATGAGGATGTTGTACTTGATATTGGGTTCATTAATCAACTGCTTTAACTGGAAATTTGAAAATGGAATGAAAATAGATGATATGAATATGGAGGACAACTTTGGAATAACATTAACTAAGGTTCAGCCACTTAGAGTCATTCCGGAAAAAACTATGTAG 1482 0.3293 MLLIFLSTLILYFLLSRFTFTKNSKIKLPPGPTPLPFIGNLLELGKKPHQSLTNLAKIYGPIMSLKFGQVTTIVVSSPNMAKEILQTHDQLLSDRAIPNSIEVHDHHKHSMTFLPISPLWRELKKICNNQLFSNKTLDETRKLRQQKLEEILNDIHQSSLNNEAVDIGKLAFKTSINLLSNTIFSLDLVHSNDAVGDFKELVMNIMKESGNPNIVDFFPVMKIFNLDIQGIYSRNAVYAGKIIDIFKDLIDQRLKLREVQGFDSNSDMLNTLLNIAQNNSKEMNRNQIQHLFLTLFVAGTETISSTIEWAMAELLKNEEVMSKAKQELEQIIGKNKLVEESDITRLPYLQAIIKETFRLHPPVPFLIPRKSNENVEICGYTIPKGAHVLVNVWAIGRNSSIWENVNLFSPFLTSEIDVKGHNFELTPFGAGKRICPALPIAMRMLYLILGSLINCFNWKFENGMKIDDMNMEDNFGITLTKVQPLRVIPEKTM 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g02045 493 Pfam Cytochrome P450 29 478 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car06g02045 493 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 2 491 - -
Car06g02045 493 Coils Coil 311 341 - -
Car06g02045 493 SUPERFAMILY Cytochrome P450 29 490 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car06g02045 493 PANTHER CYTOCHROME P450 FAMILY PROTEIN 2 491 - -
Car06g02045 493 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 428 437 IPR017972 GO:0005506|GO:0016705
Car06g02045 493 PRINTS E-class P450 group I signature 56 75 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car06g02045 493 PRINTS E-class P450 group I signature 287 304 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car06g02045 493 PRINTS E-class P450 group I signature 307 333 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car06g02045 493 PRINTS E-class P450 group I signature 350 368 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car06g02045 493 PRINTS E-class P450 group I signature 391 415 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car06g02045 493 PRINTS E-class P450 group I signature 425 435 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car06g02045 493 PRINTS E-class P450 group I signature 435 458 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car06g02045 493 Gene3D Cytochrome P450 15 491 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car06g02045 493 PRINTS P450 superfamily signature 298 315 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car06g02045 493 PRINTS P450 superfamily signature 351 362 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Car06g02045 493 PRINTS P450 superfamily signature 426 435 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g02045 Car-Chr6 20404453 20407143 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g02045 1 491 Cytochrome P450 AT2G45550 42.972 3.10e-156 452
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g02045 - - lja:Lj0g3v0208479.2 657.907