Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g02042 ATGGCTACCCATGATTCAACATGTCCACCACCAATGAAGGCCACGTCCAATGGGGCATTTCAACATGAAAACCCCATGGATTATGCACTTCCCCTGTTAATTGTACAGATAATTTTGGTGGTGGCTTTTACAAGATTCATTGCATTTCTTTGCAAGCCTCTTAGACAACCTCGAGTTATTGCAGAAGTCATTGGAGGAATATTACTAGGACCATCTGCAATAGGGAGGAGCAAAAAATTCCTAGAAACATTTTTCCCCGCAAGAAGCTTAACTGTTCTGGAAACACTAGCCAACGTTGGGCTTCTATTCTTCTTATTCCTAGTAGGTCTTGAGCTTGACATGCGTTCTATACGCAGAACAGGTCCTAAAGCTTTATGCATAGCTGTTGCTGGTATCACACTCCCATTTGTACTTGGCATAGGCACTTCACTTGTTCTACGTTCAACTATATCCAAAGATGTTGATCCAACTTCCTTCCTTGTCTTCATGGGTGTTTCTCTTTCAATCACTGCATTTCCTGTCCTTGCTAGAATCCTAGCTGAGCTCAAACTCCTCACCACCGAAGTCGGTCGTATAGCTATGTCAGCTGCTGCTGTCAATGATATTGCAGCATGGATACTTCTTGCTCTTGCAATTGCTCTCTCTGGTTCAAACTCTTCACCACTTGTTTCTTTGTGGGTTTTACTTTGTGGTGCTGGTTTTATCATCTTTGCTGTTTTGGTAATTAAGCCTTTAGTTGCATGGATGGCTAAGCGTTCCCCTGAGGGTGAACCTATAAAGGAAATCTACATATGTGTTACTTTGTCACTTGTTTTGGCTTGTAGCTTTTTAACTGATACTATTGGTATTCATGCATTGTTTGGAGCTTTTGTAGCTGGCGTTGTTGTGCCTAAAGATGGTCCTTTTGCTGGTGTTTTGACTGAGAAGATAGAGGATCTTGTTATGAGTCTTTTGTTGCCACTTTATTTTGTGTCTAGTGGATTGAAGACTAATGTGGCAACTATAAGTGGTGCACTTTCTTGGGGATTATTAGTCCTTGTTATATTCACTGCTTGCTTTGGAAAAATTGTTGGTACTTTGGTTGTGTCTTTGTTGTGTAAGGTTCCTTTTAGAGATGCCTTGACCATTGGATTTCTCATGAATACCAAGGGCTTGGTGGAGCTCATTGTTCTCAACATTGGCAAGGATCGCAAGGTACTAAATGATCAAGCATTTGCAATATGTGTTTTGATGGCATTGTTCACCACATTCATCACCACACCAATAGTGATGGCAGTGTATAAACCAGCTAGGAAGGGATCACCTTACATGCACAAAACAATTCAACGTAAAGATCCAGACACAGAGCTTAGAGTACTAGCTTGCTTCCATAGTACCTGCAACATTCCTACCTTAATCAATCTAATAGAGTCGTCGCGAGGAACGCGAAAGCGAGGAAAGTTGTGCATTTATGCAATGCACTTAATGGAACTCTCAGAAAGACCTTCAGCCATCACAATGGTTCATAAGGCACGTAACAATGGCCTGCCATTTTGGAACAAATTACAAAATGACAATAAAGACAAAATGGTAATTGCATTTCAAGCTTATGGACATTTAAGCAGTGTCAATCTTCGTCCAATGACAGCAATTTCATCTCTCAACAACATTCATGAAGACATTTGTTCTAGTGCACACCAAAAGCGAGTAGCCATGATTCTACTTCCATTCGACAAACACCAGCGTGTCGATGGAACTATGGAATCATTAGGACACTCGTTTCGCGTAATGAATGGACTTGTTCTTAGTCACGCTCCTTGCTCGGTCGGAATTTTAGTCGACCGTGGCCTTGGAGGGACTAGTCAAGTCCATGCTAGTGATGTTTCCTACAATGTTGTTGTAGCTTTCTTTGGAGGATGCGACGATCGTGAAGCGCTAGCTTATGGTATGAGAATGGCTGAACACCCTGGGATTTTACTCACTGTTATCAAGTTTATTACTCCACCAGGTATAACATTAGCATTTGGTGCTAATTTAATTGGTGTTTCAGCCAACAAAGATAGGAAAGTAATAAAAGTGGCTGATGGTAGCACACATGATGAAGATAAACAAGAGGATGATCAATTTTGGTCAGAGTTTTTAAGTGTGTGTTGTAAGAAGGAAGAGTCAATGATGTATGAGGAAAGGTTGGTGGAAAATAAAGAAGATGTTATAAATGTATTGAGGGAAAGGAATAAAAGCAATCTAATTTTGGTAGGTAGAATGCCACCAGTGGCACCTTTGCTTGATAGAAGTGATTGTGCTGAGCTTGGTCCTGTTGGAAGCTATTTGGCTACTTCTGAGTTCTCTACATTTGCATCAGTTGTTGTTTTTCAGCAATATGATCCTAAAACAGATATTCATCCATTGGTAATGGAGGTTTCTGATTATTACTCTAATATGCCAGACACACCAATACATGGTGTATAG 2448 0.4065 MATHDSTCPPPMKATSNGAFQHENPMDYALPLLIVQIILVVAFTRFIAFLCKPLRQPRVIAEVIGGILLGPSAIGRSKKFLETFFPARSLTVLETLANVGLLFFLFLVGLELDMRSIRRTGPKALCIAVAGITLPFVLGIGTSLVLRSTISKDVDPTSFLVFMGVSLSITAFPVLARILAELKLLTTEVGRIAMSAAAVNDIAAWILLALAIALSGSNSSPLVSLWVLLCGAGFIIFAVLVIKPLVAWMAKRSPEGEPIKEIYICVTLSLVLACSFLTDTIGIHALFGAFVAGVVVPKDGPFAGVLTEKIEDLVMSLLLPLYFVSSGLKTNVATISGALSWGLLVLVIFTACFGKIVGTLVVSLLCKVPFRDALTIGFLMNTKGLVELIVLNIGKDRKVLNDQAFAICVLMALFTTFITTPIVMAVYKPARKGSPYMHKTIQRKDPDTELRVLACFHSTCNIPTLINLIESSRGTRKRGKLCIYAMHLMELSERPSAITMVHKARNNGLPFWNKLQNDNKDKMVIAFQAYGHLSSVNLRPMTAISSLNNIHEDICSSAHQKRVAMILLPFDKHQRVDGTMESLGHSFRVMNGLVLSHAPCSVGILVDRGLGGTSQVHASDVSYNVVVAFFGGCDDREALAYGMRMAEHPGILLTVIKFITPPGITLAFGANLIGVSANKDRKVIKVADGSTHDEDKQEDDQFWSEFLSVCCKKEESMMYEERLVENKEDVINVLRERNKSNLILVGRMPPVAPLLDRSDCAELGPVGSYLATSEFSTFASVVVFQQYDPKTDIHPLVMEVSDYYSNMPDTPIHGV 815
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g02042 815 Gene3D - 32 433 IPR038770 -
Car06g02042 815 PANTHER CATION/H + ANTIPORTER 1 813 - -
Car06g02042 815 PANTHER CATION/H+ EXCHANGER 3 1 813 - -
Car06g02042 815 Pfam Sodium/hydrogen exchanger family 38 422 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g02042 Car-Chr6 20373846 20377927 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g02042 1 809 Antiporter Super Family AT3G17630 69.051 0.0 1100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g02042 - - gmx:100818975 1311.21