Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g02040 ATGGCTATTGGTTCTCATAGGTTATTACATCAAGGTGCAATCACAAAAGAAATGATAGCTATTGAAGAAATGGCTTGTGATGCCAAGAAGCAGACATTAAATCATGCGGATGATGCAACTAAAGTTGTCGAGATGGAAGAGAAAAAGGAGAGCAAATTTGTGAAGTTCTTAGAGGATATGTGGAACCTTTTGTCATGGGTCATGGAAGATGATGCATTAATGGTAATGACTTTGGCTAATGGTAGTGGAAGACCTCCTGATTGA 264 0.3864 MAIGSHRLLHQGAITKEMIAIEEMACDAKKQTLNHADDATKVVEMEEKKESKFVKFLEDMWNLLSWVMEDDALMVMTLANGSGRPPD 87
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g02040 87 PANTHER PLASMA MEMBRANE ATPASE 1 26 - -
Car06g02040 87 PANTHER CALCIUM-TRANSPORTING ATPASE 1 26 - -
Car06g02040 87 PANTHER CALCIUM-TRANSPORTING ATPASE 44 87 - -
Car06g02040 87 PANTHER PLASMA MEMBRANE ATPASE 44 87 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g02040 Car-Chr6 20366346 20367083 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g02040 44 87 Primary Pumps ATPases AT2G07560 65.909 5.46e-15 66.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g02040 K01535 - ath:AT2G24520 65.0846