Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g02032 ATGAAAGATGTTTGTAGAAACTTCCAGCGAGGCAGCTGTAGTTATGGAGAAAGGTGTAGATATCTTCATGTACAACAACAGCCACAGCGAAAATCTAATAATGTTAATGGTTTTGGAGGACAACCCAATTCTCAACAGCACCCAAATACAAACCCTTTTGGATTTGGGTCTGCCTCTTCTGCCTCACAGCAACAGCAAAAGACCAATCCTTTTGGTTTTGGCAACCAAAACACCAACCAGTTGAATGGGAAACCAAACCAATTCCAGCCTTTTGAAAACAAATGGAGTCGATCTTCATCCAAACCCCAGAATGGCACTCCACGTCAATCTGATAACCATTCCCAAACGGTGAATCATAAATGCACAGATCCCGAGGTTTGCAAGCGCCAGATTGCAGAAGATTTTGAGCAAGAGAAACCGCTTTGGACACTTACATGCTACGGTCATTGCAAAGGTGCTCCTTGTGACATTGTTGGAGATATTAGCTATGAAGAACTACGGGCAGCGGCTTATGAGGATGCTAAGAATGGAATGAATTTGCAATCAATTGTTGAGAAAGAGAGAAACATACTAAAATCCAAATTGGTTGAGTTTGAAAAACTACTTTCTGAACCCTACAAAATGCCTCTGAATTCTTCTATTGACATCCAAAAGCACCAATCTAATGGAGCCAATGCAAATGCATTTTCACTAGCCACTCAAAATAATGGTCCTTTAGCAGTCTCAAGCTTTAGCCAACTGGGTGCTTCAATGAACACTGGTTTTGAAAGGCCCGCTGCTGCACCACTAATGGCCACTCCAGTGCAGCCTAGTTCCTTTGGAAATGGAGGAAACTTTTTCACATCCAACACAGAAAATCTATTCGGCAGTGGAATCTTGGGTGGTCAAAGCACCCCCTTTTCTACACCAGCGGAGTTGACAATGTTTCCAGGTTCAACTTCCCAGCCCCAACAACCATCCTTTGCGTTCAATAACACTAGCTCCACTACAATGCTTCCGACAGCATCAGATGTTCTAAATACGTCCCAAGTGGAGAATGTGTCCGGAGATGTCAGTATCTGGTTAAAGGAGAAATGGAATCCTGGAGAGATTCCGGAAGAAGCTCCTCCAGATAGATTTGTTCGGTAG 1128 0.4335 MKDVCRNFQRGSCSYGERCRYLHVQQQPQRKSNNVNGFGGQPNSQQHPNTNPFGFGSASSASQQQQKTNPFGFGNQNTNQLNGKPNQFQPFENKWSRSSSKPQNGTPRQSDNHSQTVNHKCTDPEVCKRQIAEDFEQEKPLWTLTCYGHCKGAPCDIVGDISYEELRAAAYEDAKNGMNLQSIVEKERNILKSKLVEFEKLLSEPYKMPLNSSIDIQKHQSNGANANAFSLATQNNGPLAVSSFSQLGASMNTGFERPAAAPLMATPVQPSSFGNGGNFFTSNTENLFGSGILGGQSTPFSTPAELTMFPGSTSQPQQPSFAFNNTSSTTMLPTASDVLNTSQVENVSGDVSIWLKEKWNPGEIPEEAPPDRFVR 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g02032 375 ProSiteProfiles Zinc finger C3H1-type profile. 4 26 IPR000571 GO:0046872
Car06g02032 375 Pfam CCCH-type zinc finger 4 23 IPR041367 -
Car06g02032 375 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 16 2 373 - -
Car06g02032 375 SMART c3hfinal6 1 25 IPR000571 GO:0046872
Car06g02032 375 PANTHER MAKORIN-RELATED 2 373 IPR045072 -
Car06g02032 375 SUPERFAMILY CCCH zinc finger 3 26 IPR036855 GO:0046872
Car06g02032 375 Gene3D - 1 68 - -
Car06g02032 375 MobiDBLite consensus disorder prediction 27 119 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Car06g02032 zf-CCCH_4 5.9e-08 CL0537
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g02032 K14321 - gmx:100814339 499.975