Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g02031 ATGGGAGGAGGTATGAATGAAGAAGAAAAAAAGTGGCCTTTATGGTTGCAACCACTTCTCCGAACAAGTTTCTTTGTTCAATGTAAAGTCCACTCAGATTCTCACAAGAGTGAATGCAATATGTTTTGCTTGGATTGTATTAATGGAGCCCTTTGTTCTGCTTGTCTTGCTTCTCACAAAGACCACAGAACAATTCAGATAAGGAGGTCTTCATACCATGATGTGATAAGGGTATCTGAGATACAAAAATTTCTGGACATAACAGAAGTCCAAACTTACATTATAAACAGTGCAAAGATTGTGTTCTTGAATGAAAGGCCTCAACCTAGGCCTGGAAAAGGGGTTACCAATACCTGCCAAGTTTGTGATCGCAGCCTCCTTGATTCCTTCAACTTCTGCTCTCTTGGTTGTAAGATTGTTGGAACCTCCAAGAAGAAGTTGAGGAAGAATAATAAAATGTTACTAAGTAAGAAAGATGGGTCTGATGGTGAAGAGTCAATGAATGGCATAAGCAATGGAAGTGGTAGAAACAAAATCCATAGCTTTACACCTTCAACACCACCTCCAACAGTGGTCAATTATAGAACAGCTAAGAGGAGGAAAGGAGTTCCACATAGATCTCCAATGGGTGGAGGAATCATTATAGAGTACTAA 654 0.396 MGGGMNEEEKKWPLWLQPLLRTSFFVQCKVHSDSHKSECNMFCLDCINGALCSACLASHKDHRTIQIRRSSYHDVIRVSEIQKFLDITEVQTYIINSAKIVFLNERPQPRPGKGVTNTCQVCDRSLLDSFNFCSLGCKIVGTSKKKLRKNNKMLLSKKDGSDGEESMNGISNGSGRNKIHSFTPSTPPPTVVNYRTAKRRKGVPHRSPMGGGIIIEY 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g02031 217 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 5 212 - -
Car06g02031 217 Pfam PLATZ transcription factor 68 139 IPR006734 -
Car06g02031 217 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 5 212 - -
Car06g02031 217 MobiDBLite consensus disorder prediction 165 192 - -
Car06g02031 217 MobiDBLite consensus disorder prediction 155 192 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g02031 Car-Chr6 20290220 20292636 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Car06g02031 PLATZ 2.7e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g02031 - - gmx:100810757 369.007
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car08g00107 08 829311 831378 Car06g02031 06 20290220 20292636 ECH
Car06g02031 06 20290220 20292636 Car06g02031 06 20290220 20292636 ECH