Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g02025 ATGGGTTGCATATGTTCAAAGGGTTCAGCTGTAGAAGACAGCAATGAAAGTAACTCAAAGAAATTCCAATCAAATAGCACAAGACCTTCAGAGTTGAATGTTTTGAGGTTGAATTCTTCCAAGAGGGTTGAGGGAGGTAGGGTGAAAGATTTGTCATTAGATAGAGGCGATGCGAAAGCGAAAGCTTCATTGATTGAAAAGAAATCCAATGGTTCAATGAAGTTGTATGATGATCAAAATGGGAGGAAGAAGAAAATAGAGAAGGCTGAGCTGACTGTTATTGATCATCCTGGATTTGGAAGCGTTCCAAAGGCTATAGAAGGTGAGCAAGTTGCGGCGGGGTGGCCCTCATGGCTTTCTTCTGTTGCTGGTGATGCTATCAAGGGGTGGATACCAAGGAGTGCTAATACTTTTGAGAGGTTACATAAAATCGGGCAAGGAACTTATAGTACTGTTTATAAGGCTCGTGACCTGACTAATCAAAAGATTGTTGCATTGAAGAGGGTGCGGTTTGATAATCTTGATCCGGAAAGTGTCAAGTTTATGGCAAGGGAAATACATATTCTGCGTAGGCTCGACCATCCAAACATAATAAAATTGGAGGGCTTGATAACCTCAGAAACATCTCGCAGCTTGTATCTTATTTTTGAGTATATGGAACATGACCTGACAGGACTTGCATCAAATCCTAGCATCAAATTCTCTGAACCACAGCTGAAATGCTACATGCATCAACTTCTTAGTGGATTGGATCATTGTCATAGTCACGGTGTCCTCCATCGCGACATAAAGGGTTCAAATCTTCTCATTGACAATAGTGGTGTTTTAAAGATTGCCGATTTTGGTTTGGCAAATGTTTTTGACTCCCATCGGAGTATTCCATTGACGAGTCGTGTAGTAACTCTGTGGTACAGACCACCTGAACTCTTACTCGGAGCAAATCATTACGGGGTTGCAGTTGATTTATGGAGCACCGGTTGCATACTTGGGGAACTATATACCGGAAGGCCCATTTTGCCTGGAAAAACAGAGGTTGAGCAGTTGCATCGGATTTTTAAACTTTGCGGCTCACCATCCGAGGATTATTGGCTTAAGTCGCGGTTGTCTCATTCAACAGTATTCAAGCCTCCACACCATTATAGGCGATGTGTTGCTGATACATTTAAGGAATATCCGTCAACTGCTGTTAAGCTTATAGAGACGCTACTTTCCGTAGATCCATCGCATCGAGGAACAGCAGCTGCTGCTCTGAAAAGTGAGTTCTTTACATCAGAACCTTTGCCTTGTGACCCATCAAGTTTACCAAAATATCCTCCTAGCAAGGAGATTGACGCTAAAATGCGGGATGAAGCAACCAGAAGGCAAGGAGCTAATGGAGATAGGGAACAAAAAGTTGGCTCAGGGGTTAGACAAGAAAAAGGATCTAGGGCCCATGTCACAACAAAGGACACTGCTGACTTGGGGGCAACAATACAGCAAGCAAAACAGTATTCCATGTCAAAGAACCGAAGCGAATTGTCATATCCTCATAGAGAACACGTTTCTGGGAATCTTGGATTCCCACACAAACAGTCAGAAGATGTTAAAGAGATGGAAAATAATTTATCTGGCCATTTTTATAAGAGGCCATCACATTCAGGCCCATTGGCTCCTGGTTCAGGCTGGGCCAGGGGCGTTAACGAAGTCGATAATGGGCCTCCTGTTTCAACCAGAGTGAACCTATCAAAATTATCCGGGCTAGTCGCATCCAGAACTTTGTTGTCAGAAGATCAGCAGCAAAAACCAGTTTCCTTGCTCCACAGAAAACCAATTGAAGTAAGAAAATCAGTCGAGGCGAGTAATGGATCCGAGTCCAGAAGAAGGAGGGATAAAAAACGGATTGTTGATCAAAGTCAAATTGTAAATAGAAGAGTCCCAACCGAAAAATCAACTCCGGATGGACACGGGTCAAGTGGAAACAAGATATACCTGTCTGGTCCATTACTAGTTTCATCAAACAATATGGACCAGATGCTCAAAGACCACGATCGTAAGATCCAAGAGTTTTCGAGACGAGCAAGAGGTGAGAAAGTCCGTGCACAAAGAAAGTAG 2091 0.4309 MGCICSKGSAVEDSNESNSKKFQSNSTRPSELNVLRLNSSKRVEGGRVKDLSLDRGDAKAKASLIEKKSNGSMKLYDDQNGRKKKIEKAELTVIDHPGFGSVPKAIEGEQVAAGWPSWLSSVAGDAIKGWIPRSANTFERLHKIGQGTYSTVYKARDLTNQKIVALKRVRFDNLDPESVKFMAREIHILRRLDHPNIIKLEGLITSETSRSLYLIFEYMEHDLTGLASNPSIKFSEPQLKCYMHQLLSGLDHCHSHGVLHRDIKGSNLLIDNSGVLKIADFGLANVFDSHRSIPLTSRVVTLWYRPPELLLGANHYGVAVDLWSTGCILGELYTGRPILPGKTEVEQLHRIFKLCGSPSEDYWLKSRLSHSTVFKPPHHYRRCVADTFKEYPSTAVKLIETLLSVDPSHRGTAAAALKSEFFTSEPLPCDPSSLPKYPPSKEIDAKMRDEATRRQGANGDREQKVGSGVRQEKGSRAHVTTKDTADLGATIQQAKQYSMSKNRSELSYPHREHVSGNLGFPHKQSEDVKEMENNLSGHFYKRPSHSGPLAPGSGWARGVNEVDNGPPVSTRVNLSKLSGLVASRTLLSEDQQQKPVSLLHRKPIEVRKSVEASNGSESRRRRDKKRIVDQSQIVNRRVPTEKSTPDGHGSSGNKIYLSGPLLVSSNNMDQMLKDHDRKIQEFSRRARGEKVRAQRK 696
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g02025 696 ProSitePatterns Protein kinases ATP-binding region signature. 144 167 IPR017441 GO:0005524
Car06g02025 696 PANTHER CYCLIN-DEPENDENT KINASE 40 687 - -
Car06g02025 696 MobiDBLite consensus disorder prediction 609 696 - -
Car06g02025 696 ProSitePatterns Serine/Threonine protein kinases active-site signature. 258 270 IPR008271 GO:0004672|GO:0006468
Car06g02025 696 MobiDBLite consensus disorder prediction 10 34 - -
Car06g02025 696 SMART serkin_6 138 422 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car06g02025 696 MobiDBLite consensus disorder prediction 450 480 - -
Car06g02025 696 Gene3D Transferase(Phosphotransferase) domain 1 221 461 - -
Car06g02025 696 MobiDBLite consensus disorder prediction 450 481 - -
Car06g02025 696 MobiDBLite consensus disorder prediction 670 688 - -
Car06g02025 696 SUPERFAMILY Protein kinase-like (PK-like) 131 430 IPR011009 -
Car06g02025 696 PANTHER CELL DIVISION PROTEIN KINASE 40 687 - -
Car06g02025 696 ProSiteProfiles Protein kinase domain profile. 138 422 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car06g02025 696 CDD STKc_CDK9_like 138 422 - -
Car06g02025 696 Pfam Protein kinase domain 138 422 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car06g02025 696 MobiDBLite consensus disorder prediction 609 631 - -
Car06g02025 696 MobiDBLite consensus disorder prediction 633 669 - -
Car06g02025 696 MobiDBLite consensus disorder prediction 542 562 - -
Car06g02025 696 Gene3D Phosphorylase Kinase; domain 1 125 220 - -
Car06g02025 696 MobiDBLite consensus disorder prediction 1 34 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g02025 Car-Chr6 20223061 20228044 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g02025 130 465 Core Cell Cycle Gene Families AT5G10270 48.295 6.06e-110 340
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Car06g02025 Pkinase 2.6e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g02025 - - gmx:100807590 1117.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g02025 06 20223061 20228044 Car06g02025 06 20223061 20228044 ECH
Car01g02404 01 49779260 49784307 Car06g02025 06 20223061 20228044 PCT