Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g02017 ATGGCTTCTCCCATGTTTCTCATTCTCATGTTTTTGTTGACACCAATGTTGTTATCCTCATCTCAAGCAAGGGACTTTCATGTTGGTGGGAAAAATGGGTGGGTCCTTAAACCTTCTCAGGACTACAATCAATGGGCTCAAACAAACCGGTTTCAAATTAATGACACTCTCCATTTCAAGTACAATAAAGAAAATGATTCTGTTCTGGTTGTGAAGAAAGAGGACTATGATTTATGCAACACCAGCAATCCAAAGCAAAAGATGGAGGGTGGAGATTCGATCTTTAAAATTAGTGAGTCCGGTTTGTTTTTCTTCATTAGTGGCAACGTTGACCATTGTAAAAATGGTCAAAAGGTTATCATTTTAGTTATGGCTGTGAAACACCACACTCCTCTTCTTAGTCCAAGTGCACCACCGTCTCAGTCGCCGGCAAGTGGGTTGGTGCCTCCTCATATTCATTCGTCCGATTTGGTTACTCCGGCGCCGTCTCCTTCGGAAGCTTGTGTTGGTGTTAGTGTGGGTTTTTGGGTTGCGATATTCATGTTGAGTGGTTATGTAGGGCTTGTTTATTAG 573 0.4223 MASPMFLILMFLLTPMLLSSSQARDFHVGGKNGWVLKPSQDYNQWAQTNRFQINDTLHFKYNKENDSVLVVKKEDYDLCNTSNPKQKMEGGDSIFKISESGLFFFISGNVDHCKNGQKVIILVMAVKHHTPLLSPSAPPSQSPASGLVPPHIHSSDLVTPAPSPSEACVGVSVGFWVAIFMLSGYVGLVY 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g02017 190 PANTHER BLUE COPPER PROTEIN 7 136 IPR039391 GO:0009055
Car06g02017 190 Gene3D - 22 128 IPR008972 -
Car06g02017 190 ProSiteProfiles Phytocyanin domain profile. 24 125 IPR003245 GO:0009055
Car06g02017 190 CDD OsENODL1_like 24 124 IPR041846 -
Car06g02017 190 PANTHER EARLY NODULIN-LIKE PROTEIN 1 7 136 - -
Car06g02017 190 Pfam Plastocyanin-like domain 34 117 IPR003245 GO:0009055
Car06g02017 190 SUPERFAMILY Cupredoxins 23 124 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g02017 Car-Chr6 20150086 20150936 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g02017 7 183 Phytocyanin Superfamily AT4G28365 42.021 5.34e-44 143
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g02017 - - gmx:100803858 205.682
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g02017 06 20150086 20150936 Car06g02017 06 20150086 20150936 ECH
Car01g02408 01 49807397 49808709 Car06g02017 06 20150086 20150936 PCT