Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g02011 ATGGCCAACTCCCTCACTTTCAGAACTAAAACCGCCACCGACGATCCTCTCTTGCCCTTTCTCCGGTCAATCAGGACTGCCCTAGAAGATTCTAATGGCTCCAGTGAAAATTTCACCAACTTACTCAGTGATTGCATCACTATATTCAAGGACAATCACCGTTACCGAGACGATCCCAGATTCCTCAAGATCTGGCTCCTTTATATGGGAGTTAGTGATGATTTTTATAGAGTTTTCAAAGAAATGATGGATAGTAATGTATGTGCCAAAAATGCTTCACTTTATGTGTTATCTGCAAGTTTTTTTGAAGCAAAGGGTAGATTGTGCGATGCCCAAACGGTCTATAAGCTCGGCATTTCCAGAAATGCAGAGCCGATTGAGTCGATGAAGAAGGCATATACCTTATTTCTCAGTAGAATGTCCGAAATATGTAATACTGCTTCAAATCAGAAGGTTGATTATAAAGAATCTCCTATATTGGAAAATAATGGCATTAATCCATGGGACCCCTCTACTATGAATGACCTTTTGAAGAAGATATATCCTTTAATTACAAAATTTGATGGGTATCATTCGAACACTAAATCTTATACAGGAAAAGTGGCCTTGTCTACTTTGAAGAATGCATCAAGGAATAAAGTTATAGAGATAGGTGGAATGAAGTACCATATCAAGGGCTGTGCTGGACAGGGTGGTTTTGCTCAAGTATACAAGGCACACGTCAACAGTGATCCTGATGATGTTGTGGCACTAAAGATACAAAAGCCAGCCTTCTCTTGGGAATTTTACATGTATCGTCAGCTTGATCAGCGCATCTCTGGTAGAGAAAGGTCAAGCTATGGTTTCGCTCACAGAATTCATCTCTATTCTGACTGTAGCATACTCGTCTGTGACTATTTATCTCATGGGACACTACAGGATGTCATCAACTCATATGTGGTCATAGGAAAATCCATGGAAGAAGTGTTGTGTATATACTACACAATTGAAATGTTGCACATGGTTGAAACCTTGCATGATGTTGGATTGATACATGGTGATTTCAAGCCTGATAATCTACTTATTCGCTATGCTAGGGGTAGCCTCACAGAAGATGAGTTTTTGGATCGATGTGGTTCTTGGCCTGATCAGGGTCTTTGCCTTGTTGACTGGGGAAGAGGGATCGATCTACATCTCTTTTCAGATAACACAATATTTAAGGGAGATTGCAGAACATCTGGTTTTCGATGCATTGAAATGCAAGAGGATAAGCCGTGGAAATTTCAGGTAGATGCATATGGCCTTTGCGCTGTTGTTCATGTGATGCTGCATAATTCCTATATGGAAATTGTCAAAAAAGAATCATCTGATGGGGGCTTTGTGTATCTTCCCAGACTACCCTTTAAACGTTACTGGAACATCGAGCTTTGGAAAAATTTCTTCACTAAGATGCTAAATAACTACCCCGGCCGTGATGATAGGAAGTTGCTGCAGGAATTGAAGAAGTCCTTCCAGGACTATATGGGCTCTGATCCTCAACATATTAGGAAACTAAAGGAGTTACTCGGGAAGCAAAGGATTTCTCTGTGTTCTGCTTAG 1578 0.4056 MANSLTFRTKTATDDPLLPFLRSIRTALEDSNGSSENFTNLLSDCITIFKDNHRYRDDPRFLKIWLLYMGVSDDFYRVFKEMMDSNVCAKNASLYVLSASFFEAKGRLCDAQTVYKLGISRNAEPIESMKKAYTLFLSRMSEICNTASNQKVDYKESPILENNGINPWDPSTMNDLLKKIYPLITKFDGYHSNTKSYTGKVALSTLKNASRNKVIEIGGMKYHIKGCAGQGGFAQVYKAHVNSDPDDVVALKIQKPAFSWEFYMYRQLDQRISGRERSSYGFAHRIHLYSDCSILVCDYLSHGTLQDVINSYVVIGKSMEEVLCIYYTIEMLHMVETLHDVGLIHGDFKPDNLLIRYARGSLTEDEFLDRCGSWPDQGLCLVDWGRGIDLHLFSDNTIFKGDCRTSGFRCIEMQEDKPWKFQVDAYGLCAVVHVMLHNSYMEIVKKESSDGGFVYLPRLPFKRYWNIELWKNFFTKMLNNYPGRDDRKLLQELKKSFQDYMGSDPQHIRKLKELLGKQRISLCSA 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g02011 525 SUPERFAMILY Protein kinase-like (PK-like) 221 498 IPR011009 -
Car06g02011 525 Pfam Protein kinase domain 222 438 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car06g02011 525 PANTHER MITOTIC CHECKPOINT SERINE/THREONINE-PROTEIN KINASE BUB1 145 524 IPR015661 GO:0007094
Car06g02011 525 PANTHER MITOTIC CHECKPOINT SERINE/THREONINE-PROTEIN KINASE BUB1 8 141 IPR015661 GO:0007094
Car06g02011 525 SMART serkin_6 222 501 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car06g02011 525 Gene3D Transferase(Phosphotransferase) domain 1 220 521 - -
Car06g02011 525 ProSiteProfiles BUB1 N-terminal domain profile. 3 157 IPR013212 -
Car06g02011 525 SMART mad3_bub1_i 1 119 IPR013212 -
Car06g02011 525 ProSiteProfiles Protein kinase domain profile. 222 520 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car06g02011 525 ProSitePatterns Serine/Threonine protein kinases active-site signature. 343 355 IPR008271 GO:0004672|GO:0006468
Car06g02011 525 Pfam Mad3/BUB1 homology region 1 11 119 IPR013212 -
Car06g02011 525 Gene3D - 5 156 - -
Car06g02011 525 PANTHER BUB1 KINASE, ISOFORM A-RELATED 145 524 - -
Car06g02011 525 PANTHER BUB1 KINASE, ISOFORM A-RELATED 8 141 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g02011 Car-Chr6 20097381 20103954 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g02011 221 441 CBL-interacting serine-threonine protein kinases AT2G26980 24.779 2.92e-07 50.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK BUB Car06g02011 Pkinase 6.2e-12 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g02011 K02178 - gmx:100802272 851.277
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g02011 06 20097381 20103954 Car06g02011 06 20097381 20103954 ECH