Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Car06g01996 | ATGGGTGTTGATTACTACAAAATCTTGCAGGTTGATAAGAATGTCAAAGACGAAGACTTGAAGAAGGCTTATAGAAAACTTGCTATGAAATGGCACCCTGATAAAAACCCAACCAACAAAAAAGATGCAGAAACTAAGTTCAAGCAAATTTCTGAAGCTTATGAGGTGTTAAGTGATCCTGAAAAGAGAGCTATCTATGATCAATATGGGGAAGAGGGTTTAAAGGGGCAAGTTCCTCCTCCTGAAGCTGGTGCTGGTGGTGGAACTAGTTTCTATTCCACAGGAGATATACCTGGATCGTTTCGGTTTAATCCGAGGAATGCAGATGAGATTTTTGCAGAGTTTTTTGGGTTCTCAAGCCCATTtggtggaagaggtggtggtggtggtggCATGAGATCTAGGTTCTCTGGAGGAATGTTTGGTGATGATATGTTTAGATCTTTTGGTGAAGGTGGAGGAATACATATGAATCAAGCTGCACCTCGTAAAACACCTCCTATTGAGAAAAAGTTGGCTTGTACTCTGGAGGAGATATATAGAGGAACTACAAAGAAGATGAAGATCTCTAGAGAAATAGCAGATGCCAGTGGCCAAACAATGCCAGTGGAAGAGATATTGACCATAAATGTGAAGCCTGGTTGGAAAAAGGGAACAAAGATCACCTTCCCAGAGAAAGGTAACGAACAGCTGAATGTAACTGCCGCAGATCTTGTTTTTGTGATCGATGAAAGGCCACACAGTGTCTTCAGTCGTGAAGGGAATGATTTGATTGTGACTCAAAAGATATCTCTTGTGGAGGCCTTAACTGGTTATACAGTACACCTCACTACCCTAGATGGTAGAAACTTAAGCATACCAATCAACAATGTTATCCATCCTAACTATGAGGAGGTTGTTCCAAAAGAAGGAATGCCTCTCCCCAAGGATCCATCAAAGAAGGGTAACTTGAGGATAAAATTCAACATTAAGTTCCCAACTCGGCTCACTGATGAACAAAAAATAGGAATTAGGAAACTCTTGACTGCCTCAGCTTGA | 1038 | 0.3979 | MGVDYYKILQVDKNVKDEDLKKAYRKLAMKWHPDKNPTNKKDAETKFKQISEAYEVLSDPEKRAIYDQYGEEGLKGQVPPPEAGAGGGTSFYSTGDIPGSFRFNPRNADEIFAEFFGFSSPFGGRGGGGGGMRSRFSGGMFGDDMFRSFGEGGGIHMNQAAPRKTPPIEKKLACTLEEIYRGTTKKMKISREIADASGQTMPVEEILTINVKPGWKKGTKITFPEKGNEQLNVTAADLVFVIDERPHSVFSREGNDLIVTQKISLVEALTGYTVHLTTLDGRNLSIPINNVIHPNYEEVVPKEGMPLPKDPSKKGNLRIKFNIKFPTRLTDEQKIGIRKLLTASA | 345 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Car06g01996 | 345 | Pfam | DnaJ domain | 4 | 67 | IPR001623 | - | |
Car06g01996 | 345 | CDD | DnaJ_C | 166 | 329 | - | - | |
Car06g01996 | 345 | SUPERFAMILY | Chaperone J-domain | 3 | 130 | IPR036869 | - | |
Car06g01996 | 345 | Pfam | DnaJ C terminal domain | 168 | 326 | IPR002939 | - | |
Car06g01996 | 345 | CDD | DnaJ | 4 | 59 | IPR001623 | - | |
Car06g01996 | 345 | SUPERFAMILY | HSP40/DnaJ peptide-binding domain | 249 | 334 | IPR008971 | GO:0006457|GO:0051082 | |
Car06g01996 | 345 | Gene3D | DnaJ domain | 3 | 125 | IPR036869 | - | |
Car06g01996 | 345 | Gene3D | - | 247 | 327 | - | - | |
Car06g01996 | 345 | Gene3D | - | 167 | 245 | - | - | |
Car06g01996 | 345 | SUPERFAMILY | HSP40/DnaJ peptide-binding domain | 162 | 257 | IPR008971 | GO:0006457|GO:0051082 | |
Car06g01996 | 345 | PANTHER | DNAJ HOMOLOG SUBFAMILY C MEMBER | 1 | 342 | - | - | |
Car06g01996 | 345 | PANTHER | DNAJ HOMOLOG SUBFAMILY B MEMBER 13-LIKE | 1 | 342 | - | - | |
Car06g01996 | 345 | PRINTS | DnaJ domain signature | 6 | 24 | IPR001623 | - | |
Car06g01996 | 345 | PRINTS | DnaJ domain signature | 24 | 39 | IPR001623 | - | |
Car06g01996 | 345 | PRINTS | DnaJ domain signature | 42 | 62 | IPR001623 | - | |
Car06g01996 | 345 | PRINTS | DnaJ domain signature | 62 | 81 | IPR001623 | - | |
Car06g01996 | 345 | SMART | dnaj_3 | 3 | 62 | IPR001623 | - | |
Car06g01996 | 345 | ProSiteProfiles | dnaJ domain profile. | 4 | 70 | IPR001623 | - | |
Car06g01996 | 345 | ProSitePatterns | Nt-dnaJ domain signature. | 47 | 66 | IPR018253 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Car06g01996 | Car-Chr6 | 19932632 | 19934911 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Car06g01996 | 5 | 69 | C2H2 Transcription Factor Family | AT1G74250 | 36.232 | 1.56e-08 | 54.3 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Car06g01996 | K09510 | - | gmx:100797487 | 583.563 |