Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g01995 ATGGAGAACTGTTCagaagtagagaagaagaagaagCCCCCGGAAGAGGAGAACAAGGTCAAGCGCAAAATGAAAACTGCTTCACAGTTGGAGATTCTGGAAAAAGCATATGCAGCTGAGCCTTACCCTTCTGAGGAGTTCCGAGTTGAGCTATGTGTCAAGTTGGGTTTATCTGATCGTCAATTGCAGATGTGGTTCTGTCACCGCAGACTAAAGGATAGGAAGGCTGTTAAGACGGCTGCATCGATTTCGGCACCAACCGTGGAAGGTGTTGAGCAAATAGAAATTGCGGATGTTAGGCATGATCATGGTTTGGTTTCTGTTTTGAAGCTAATTGATCACGACGACTTGCGGCGAGTTGTGCCGCAGCATGGGATGATGGCATATCCTAGGATGGGAGCTGGATTGCATGCAATGGATAGCAGCAGCAGTTTCCATGAACCTCAACTGACCATACTGGAGCTGCGAGCTATTGCATTTGTGGAAAGACAGTTGGGGGAGGCATTAAGAGAGGATGGACCCATTCTTGGGATGGAGTTTGATTCCTTGCCGCCGGGTGCATTTGGCGCGCCATTAGGGGTAGTGTCAATAGGGCAACACAGGGAATCTGAACTGCCTGTTGAGGCAAAAGTTTATGAACATCTGAATAAGGGCGTTTCAAGGACTCTCCATGAATATCAATTTATTCCAGAGCAGCCTACTGTTAGAAACGAGATGTATGCGAGAGTTACCACATCTATCCACTTTAGTTCTCTTGATGGTGTTCCACATTCTGGGACTACACTATCTAGTGGGCAATCTTTCCTTAATGGTAATGAATTTGCACCTAATGTGTATGGAGTCCAAGGTCAGAAGATACCTAGTCTAAATCTTTTGTCTCAGTCTCAGCAAGGTAGGCCGAACAATCTTATGTTTTCTGCTTCAGGAGGGAATGATGATGTTCCACGAAAGAACCCATTTGTCGATGTAACTCTTGACACTCATAGGGTGGCTGACCAAGTAACTCCAATTGACAGCCCTCTAGTGCCATCAGATAGGAGGGTTATCCACGAGGAGGAACTTTCAAGATTTCAAAGGAAGCGAAAGAATGAAGAGGCTCGAATGCAACGGGAATTTGAAGCGCAAGAGAAAAGAATTAGGAAAGAGCTTGTAAAACAGGATATCCTAAGGCAAAAGAGAGAGGAACAAATAAAGAAAGAGATGGAGAGGCAAGAACGTGAAAGGAAGAAGGAAGAGGAACGGTTATTGCGTGAAAGACAGCGAGAGGAGGAGAGATTCCTAAGAGAGCAGAGGCGTGAACAGGAGCAGCGGGAGAAGTTTTTGCAGAAGGAATCAATCAGAGTTGAGAGACTGAGACAAAAGGAAGAACTACGGAGGGAGAAAGAGGCAGCAAGGATTAAAGCTTCCAGTGAGAGAGCTATTGCCCGCAGAATGGCTAAAGAATCAATAGACCTTATTGAAGATGAACATCTGGAACTCATGGAGTTAGCTGCATCAAAGAAGGGGCTATCTTCAATATTGGCTCTCGACTACGAAACTATGCAAAATCTTGAATCATACGGAGACGGGCGGACTTCCTTCCCACCCAAGTCTGTACGGTTGAAAAAAGCTTTTTCTATTCAACCTTGGTCAGATTCTGACGAGAACGTAGGAAATCTTCTGATGGTTTGGAGGTTCTTGATTACCTTTGCTGATGTTCTTGGAATATGGCCATTTACCTTGGATGAGCTTTTACAAGCTTTTCATGACTATGACCCTAGGATATTAGGTGAGATCCATATTGCTCTTCTGAGATCCATTTTAAAAGATATTGAGGATGTTGCAAGAACACCCACTACTGGATTAGGGGCTAACCAAAACAACATTACGAACTCTGGTGGAGGGCATCCACAGGTAGTTGAAGGGGCATATGTATGGGGTTTTGATATAAGAAATTGGCAGTGGCATTTAAATCCATTAACATGGCCAGAGATTTTGCGACAATTCGCATTGTCAGCTGGATTTGGGCCTCTGATGAAGAAACAGAATATTGAGCAGGTGCATCCATGCAATGAGGGTAATGATGGTAAAGATATAATTTCGAATCTACGCAGTGGAGCTGCTGTTGAAAATGCTGTTGCTATTATGCAAGAGAAGGGATTACCTAATCGAAGAACATATAGGCCTCGTTTGACGCCTGGAACTGTCAAATATGCTGCATTTCATGTCCTTTCTCTGGAAGGTAGCAGAGGCCTCAATATATTAGAACTTGCAGACAAGATTCAGAAATCTGGCCTTCGTGATCTTACAACAAGCAAAGCACCAGAGGCTTCTATAGCTTCTGCTTTGTCTAGGGATACAAAACTATTTGAAAGGACAGCTCCTTCAACATATTGTGTACGTCCTGCATATAGAAAGGACCCAGCTGATTCTGAAGCAATTTATTCAGCTGCGAGGGAAAAAATCAGGGTTTTCAAAAGTGGATTTGTGGGTGCAGAAGAAGCTGATGATGGTGAAAGGGATGAAAATTCTGAAAGTGATATGGCAGAAAATCATGAGATTGATGATTTGGGAGCTGAAACAAATACGAAAAAAGAGGTCTCAAATTCTGAGAAATTTAATGCAAACACTGTAATGAGAAATGGGAAGGATAATGGCGAGGGTTTTCAAACTCCTGATAGTTGCCATGAGAAAGTGGATGAGGGTTTAGCGTCAACTGTTGATGAAGGCTTCAACAAGCATAAAGATGTCCATACATCTAGTGAAATTGCTGTTTGCAGCCATGATGTTACTAATCCTATTCTAGAAGGTATGGATGTTGATGAAAACACTCTAGGTGAACCATGGGCACAAGGACTTATGGAGGGAGAGTACTCGGATCTTAGTGTAGAGGAGCGTCTTCACGCTCTTGTTGCTTTGATTAATGTGGCAATTGAAGGGAATTCTATTCGTCTTATACTTGAGGAACGTCTAGAAGCCGCAAATACTTTAAAGAAGCAGATATGGGCTGAGGCACAGCTTGATAAACGCCGTATCAAAGACGATTGTTTTGTTAAATTGCAGTCGTTCTCATATTTGGGCAACAAAAATGAACCAGCTGTTACATTTCCATCAGTAGAGGGTAAACAGTGCCCATTGCACACTGTTCATGTCAAAATTGATAAGGCTTCAGTCACTCCCTATGACCAGCATGAACAGATAAATGCACTACAGGGAAATCAAAATCATCTGCAGAGTTCCCTATTAGATGTGAACATACAGAGGCAAGATTGTCCTACTGGCCCAGATAATTGTTCTCTCCAACAATCTGGATATGTTGCTGAAAAATCAAGATCAAATTTCAAATCATATATTGGCCACTTGGCGGAACAAACTTACATGTATAGATCATTGCCTCTTGGTTTGGATAGAAGACGAAACCGATACTGGCAATTCATTACATCTGCCTCTCAAAACGATCCAGGTTGTGGCAGGATATTTGTGGAATTGCATGATGGCTGTTGGAAGCTGATTGATTCTGAAGAGGGTTTTGATGCCCTATTAGCATCATTGGACTTACGTGGGATCAGGGAGTCCCACTTGCATATGATGCTGCAAAGAATTGAGATGTCATACAAGAACTCTGTTAGAAGAAATGTCCAAAATGGTGATATGGGAATTCAAAATGGAGACACCATGAAGAAACTCAAGACAGAAACAGTTAAAATGGGTACAGACCAAGATTGCAGTGCCACTTCTGTCTATGTGGATGATTTGGATACATCAGTGACCTCAACATCTTTTATGGTTCAGCTCGGAAGAAATGAAGTTGAGAACAAAGATGCTTATATGAGATACTGGGACTTTGAGAAATGGATGCAAAAGCAATGTCTAAATTGCTCAGTATCATTTGCAATGAAGTTTGGGAAGAAGAGGTGCAACCAACTGCTGCTAATGTGTGATTTATGCCATCGTGTCTATTTCTCTAGAGGAACGCCGTCGCCATGTCCTTCATGCCACAGAACTTCCACTAGTCAGGACAACTCCAGTTCTTATGAATGTATTGCACGTTCTGAAGGCAAAAGGAAGATTGGCACTCACCTTTTTAATCATCCATCCTCTTCTCCATTCAGAATGAGATTGCTCAAAATCCTCCTGTCGGTTGTTGAGGTAACCCTTCCTCAAGAAGCTCTTCAGCCTTTTTGGACAGAGAGGTACAGGAAGTCTTGGAGTTCAAAGCTGGAAGCTTCATCATCACCTGAAGACATTCTGCAGGTTATAATCTGGAACATCTTGATAAAGCATGCTCATGCTTTGGAGTTTTTAGCTTGCTAA 4293 0.4249 MENCSEVEKKKKPPEEENKVKRKMKTASQLEILEKAYAAEPYPSEEFRVELCVKLGLSDRQLQMWFCHRRLKDRKAVKTAASISAPTVEGVEQIEIADVRHDHGLVSVLKLIDHDDLRRVVPQHGMMAYPRMGAGLHAMDSSSSFHEPQLTILELRAIAFVERQLGEALREDGPILGMEFDSLPPGAFGAPLGVVSIGQHRESELPVEAKVYEHLNKGVSRTLHEYQFIPEQPTVRNEMYARVTTSIHFSSLDGVPHSGTTLSSGQSFLNGNEFAPNVYGVQGQKIPSLNLLSQSQQGRPNNLMFSASGGNDDVPRKNPFVDVTLDTHRVADQVTPIDSPLVPSDRRVIHEEELSRFQRKRKNEEARMQREFEAQEKRIRKELVKQDILRQKREEQIKKEMERQERERKKEEERLLRERQREEERFLREQRREQEQREKFLQKESIRVERLRQKEELRREKEAARIKASSERAIARRMAKESIDLIEDEHLELMELAASKKGLSSILALDYETMQNLESYGDGRTSFPPKSVRLKKAFSIQPWSDSDENVGNLLMVWRFLITFADVLGIWPFTLDELLQAFHDYDPRILGEIHIALLRSILKDIEDVARTPTTGLGANQNNITNSGGGHPQVVEGAYVWGFDIRNWQWHLNPLTWPEILRQFALSAGFGPLMKKQNIEQVHPCNEGNDGKDIISNLRSGAAVENAVAIMQEKGLPNRRTYRPRLTPGTVKYAAFHVLSLEGSRGLNILELADKIQKSGLRDLTTSKAPEASIASALSRDTKLFERTAPSTYCVRPAYRKDPADSEAIYSAAREKIRVFKSGFVGAEEADDGERDENSESDMAENHEIDDLGAETNTKKEVSNSEKFNANTVMRNGKDNGEGFQTPDSCHEKVDEGLASTVDEGFNKHKDVHTSSEIAVCSHDVTNPILEGMDVDENTLGEPWAQGLMEGEYSDLSVEERLHALVALINVAIEGNSIRLILEERLEAANTLKKQIWAEAQLDKRRIKDDCFVKLQSFSYLGNKNEPAVTFPSVEGKQCPLHTVHVKIDKASVTPYDQHEQINALQGNQNHLQSSLLDVNIQRQDCPTGPDNCSLQQSGYVAEKSRSNFKSYIGHLAEQTYMYRSLPLGLDRRRNRYWQFITSASQNDPGCGRIFVELHDGCWKLIDSEEGFDALLASLDLRGIRESHLHMMLQRIEMSYKNSVRRNVQNGDMGIQNGDTMKKLKTETVKMGTDQDCSATSVYVDDLDTSVTSTSFMVQLGRNEVENKDAYMRYWDFEKWMQKQCLNCSVSFAMKFGKKRCNQLLLMCDLCHRVYFSRGTPSPCPSCHRTSTSQDNSSSYECIARSEGKRKIGTHLFNHPSSSPFRMRLLKILLSVVEVTLPQEALQPFWTERYRKSWSSKLEASSSPEDILQVIIWNILIKHAHALEFLAC 1430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g01995 1430 Coils Coil 390 444 - -
Car06g01995 1430 MobiDBLite consensus disorder prediction 838 860 - -
Car06g01995 1430 ProSiteProfiles DDT domain profile. 547 606 IPR018501 -
Car06g01995 1430 MobiDBLite consensus disorder prediction 1 25 - -
Car06g01995 1430 Coils Coil 347 367 - -
Car06g01995 1430 ProSiteProfiles 'Homeobox' domain profile. 16 76 IPR001356 GO:0003677
Car06g01995 1430 PANTHER HOMEOBOX-DDT DOMAIN PROTEIN RLT2 1 1413 IPR044977 GO:0006357
Car06g01995 1430 PANTHER HOMEOBOX-DDT DOMAIN PROTEIN RLT2 1 1413 - -
Car06g01995 1430 CDD homeodomain 21 75 IPR001356 GO:0003677
Car06g01995 1430 MobiDBLite consensus disorder prediction 826 881 - -
Car06g01995 1430 Pfam Williams-Beuren syndrome DDT (WSD), D-TOX E motif 1122 1194 IPR028941 -
Car06g01995 1430 Pfam DDT domain 548 603 IPR018501 -
Car06g01995 1430 Pfam WSTF, HB1, Itc1p, MBD9 motif 1 940 980 IPR028942 -
Car06g01995 1430 ProSiteProfiles HARE-type HTH domain profile. 727 796 IPR007759 GO:0006355
Car06g01995 1430 MobiDBLite consensus disorder prediction 861 881 - -
Car06g01995 1430 Pfam Homeodomain 21 75 IPR001356 GO:0003677
Car06g01995 1430 SMART testlast3 547 606 IPR018501 -
Car06g01995 1430 SMART HOX_1 18 80 IPR001356 GO:0003677
Car06g01995 1430 Pfam HB1, ASXL, restriction endonuclease HTH domain 727 794 IPR007759 GO:0006355
Car06g01995 1430 Gene3D - 14 83 - -
Car06g01995 1430 Coils Coil 447 474 - -
Car06g01995 1430 SUPERFAMILY Homeodomain-like 16 76 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g01995 Car-Chr6 19916721 19932322 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g01995 17 1413 Homeobox Transcription Factor Family AT5G44180 50.105 0.0 1222
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Car06g01995 WSD 3.4e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g01995 - - gmx:100797480 1810.81