Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g01993 ATGAGTGAAGAAATGACTCTATGCAGTGACATTCAAAACAATGATCATAGTGTAACACTGGAGGGACGAACGGATAGCTTAATTAGAACATGTCTCACATGTGGTCATCATATCAAATGCCAAGATCAGGGTGGTGGAATTAATGACTTACCTGGATTGCCTGCTGGAGTGAAGTTTGATCCAACAGATCAAGAGATACTTGAACATTTGGAAGCGAAGGTGCGGTCTGATATTCATAAGCTTCATCCTCTAATTGATGAGTTCATACCTACTCTTGAAGGAGAGAATGGAATTTGCTATACTCATCCAGAAAAATTGCCAGGAGTTAGCAAAGATGGTCTGATCCGTCATTTCTTTCACCGACCTTCGAAAGCATACACAACAGGAACAAGAAAAAGAAGAAAAGTACATTCAGATGAAGATGGTAGCGAAACACGTTGGCACAAAACAGGTAAAACAAGACCAGTCTACAACAATTCCAAGTTAAAAGGCTACAAAAAGATCCTCGTACTTTACACTAACTATGGAAAACTAAGAAAGCCAGAGAAAACAAATTGGGTGATGCATCAATACCATCTTGGTAGTAATGAAGAAGAGAAAGAAGGAGAGTTAGTTGTTTCCAAAGTTTTCTATCAAACACAACCAAGACAATGTGGTGGTGGTTCATTGATTAAAGACTCTGTTTCTGAAAAAACTATCAAGGGTCAAAATGGGAATCAAGTGGTAATTAATGGTAAAAATAGTACTAATGGATTTCTTGACTACTATCGTTCAAATTTCATTTCTTTTGATCAAGGAAATCAACATAGAGATACTAATGCTCAAGTGATTAATCATTTTCCTGTTCTTGAAGGTGCTCCTAATTTCAATATTCCTTGA 879 0.3697 MSEEMTLCSDIQNNDHSVTLEGRTDSLIRTCLTCGHHIKCQDQGGGINDLPGLPAGVKFDPTDQEILEHLEAKVRSDIHKLHPLIDEFIPTLEGENGICYTHPEKLPGVSKDGLIRHFFHRPSKAYTTGTRKRRKVHSDEDGSETRWHKTGKTRPVYNNSKLKGYKKILVLYTNYGKLRKPEKTNWVMHQYHLGSNEEEKEGELVVSKVFYQTQPRQCGGGSLIKDSVSEKTIKGQNGNQVVINGKNSTNGFLDYYRSNFISFDQGNQHRDTNAQVINHFPVLEGAPNFNIP 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g01993 292 ProSiteProfiles NAC domain profile. 53 212 IPR003441 GO:0003677|GO:0006355
Car06g01993 292 SUPERFAMILY NAC domain 49 212 IPR036093 GO:0003677|GO:0006355
Car06g01993 292 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 5 287 - -
Car06g01993 292 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 5 287 IPR044799 GO:0003700
Car06g01993 292 MobiDBLite consensus disorder prediction 132 151 - -
Car06g01993 292 MobiDBLite consensus disorder prediction 127 155 - -
Car06g01993 292 Pfam No apical meristem (NAM) protein 54 193 IPR003441 GO:0003677|GO:0006355
Car06g01993 292 Gene3D NAC domain 62 216 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g01993 Car-Chr6 19910224 19912296 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g01993 5 231 NAC Transcription Factor Family AT4G28500 68.619 1.79e-116 335
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Car06g01993 NAM 5.6e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g01993 - - gmx:100797459 501.516