Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g01987 ATGATGAAAGAAAATTTCAATGGCAAGTGTGGATCTTCTTCTCATAAATCTATGAAAGAGAAGGAGAAATACCTGGTGGATAAGATTCAAGGGATTTTCTCAAATATTCAATTGGCGAGAAAGGAAAGCAGGGCTAATGACATTGTGATCTTCGAGGAGCAGATGCATCAGTTGCTTCGAGAGTGGCAGGCGGAACTGGAATCTCCAGCTACCTCGTTAGCTGATGGGAGCCTTGGTTCATTTACCGGGGATCTAGCTCAACTGTTGCAAGCAATTGAGGAGAAAGATGATGCAACAAGTCCATTAACAAAACTTGTGCCTTTGAAGAATGATCTTCATCAAAATAACATTAGTGATAGCAATTATCCGTTTTTTCAGGAGAAATGTTTTAATAATAACCAGACACTAGATCATACTTTTGAGGGCTCTGCTTCAACTCTGTTCAACAATCCTTTAAATAGCTCAGACATGGCTCAGTTGCATTATCATCCGTTCAGTTTAAATCAAGATATGGATCACAACACTGTAGGTCACAACTCTGATTTGATTGGTCAGTTTGATTTTTATCATCAGGACCTCAGCCTCGGGCACAACACAGAAATAAAAAACTCAGAATCAGCTCAATTTACTTTTGATGAAGGCTTTGATTGTAGCCAATTTTTAAGAGATGACGACACTGCACAATTCGGAGAGAATCATATACCTAACATCCTTCCAAGTATCCGCCCTCCACCTTCTGCTTTTCGAGGCCCAAAATGTGCACTGTGGGACTGTTTCAGACCTGCTCAAGGGTTAGAAGGGTGTCAGGACTACTGTAGTAGTTGTCATGAGCTTTTGGCAAATAATGAGGGTCTCCCCGGCATGACTCCGATTTTGCGACCTTACGGCATTGATGTAAAAGATGGTCCTTTGTTTGCTGCTGTTCTTGCAAAGACGCAGGGAAAAGAAGTGGGCATCCCTAAGTGTGAAGGTGCTGCTTCAACGAAAGCCCCCTGGAATGCTTCCGAGTTCTTTGACCTTTCTTTCCTTGACGGTGAAACTGTTAGGGAGTGGCTCTTCTTTGACAAGCCTAGAAGGGCGTTTGACAGTGGAAATAGAAAACAAAGATCTCTTCCCGATTACAGCGGGCGTGGTTGGCATGAATCAAGGAAGCAGGTGATGAAGGAACATGGTGGACAAAAGAGATCTTATTACATGGACCCCCAGCCTCTTAGTTATCTTGAGTGGCATTTGTTTGAGTATGAAATCAATAACCATGATGGTTGTGCATTATACAGACTAGAATTAAAGCTTGTAGATAAAAAGAAAAGTCCTAAAGGAAAAGTGACTAAGGAATCTCTTACTGATTTACAAAACAAGATGGGAAAGTTAACTGCGGCTTTTCCTTCGTCAGATGATGGAAACCCTGTCAAGGGAAAAACTGATGCCAAATCTGAGGATATTGGGCCACCTGAAAATTAA 1461 0.4175 MMKENFNGKCGSSSHKSMKEKEKYLVDKIQGIFSNIQLARKESRANDIVIFEEQMHQLLREWQAELESPATSLADGSLGSFTGDLAQLLQAIEEKDDATSPLTKLVPLKNDLHQNNISDSNYPFFQEKCFNNNQTLDHTFEGSASTLFNNPLNSSDMAQLHYHPFSLNQDMDHNTVGHNSDLIGQFDFYHQDLSLGHNTEIKNSESAQFTFDEGFDCSQFLRDDDTAQFGENHIPNILPSIRPPPSAFRGPKCALWDCFRPAQGLEGCQDYCSSCHELLANNEGLPGMTPILRPYGIDVKDGPLFAAVLAKTQGKEVGIPKCEGAASTKAPWNASEFFDLSFLDGETVREWLFFDKPRRAFDSGNRKQRSLPDYSGRGWHESRKQVMKEHGGQKRSYYMDPQPLSYLEWHLFEYEINNHDGCALYRLELKLVDKKKSPKGKVTKESLTDLQNKMGKLTAAFPSSDDGNPVKGKTDAKSEDIGPPEN 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g01987 486 MobiDBLite consensus disorder prediction 455 486 - -
Car06g01987 486 PANTHER TRANSCRIPTION FACTOR VOZ1 2 479 IPR039277 GO:0006355|GO:0048578
Car06g01987 486 MobiDBLite consensus disorder prediction 363 384 - -
Car06g01987 486 MobiDBLite consensus disorder prediction 470 486 - -
Car06g01987 486 PANTHER TRANSCRIPTION FACTOR VOZ2 2 479 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g01987 Car-Chr6 19841710 19847566 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g01987 10 462 VOZ-9 Transcription Factor Family AT1G28520 52.079 1.03e-153 444
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF VOZ Car06g01987 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g01987 - - gmx:100792210 786.178