Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g01979 ATGGAGTCGTATAGCTTCCACTCGGCATCTTTTCTTCTTCTCGCTTCTGCCGTATGTTGCTTTTCACACCCTTCTCTCCTCGGCGTTCACCCTCTAGATGAGAAATATTATACCTCTCATCTCATCCAATGTAAGGATGGATCAAAATCCTTCTCCAGTGACCGTCTCAACGACAACTTCTGTGATTGCTCTGATGGCACTGATGAACCTGGAACTAAAGCTTATCCCGCAGGGAAGTTTTATTGCAGAAACCTAGGAAGCAAGCCACAGTTTATAGTTTCTTCTCATGTTAATGATTGTTATTGTGATTGTTGTGATGGGAGTGATGAATATGATGGAACCATTCAGTGTCCCAACACATGTGTCATGGGTGGGAATGCAGAGAACATGTATGGCAATTATAATTCAAAAGTAAGTGATCTGGGTGTTTTTTCTGAAAAAGAAACAAAAAATGGAGTGAAGTCAGAGGAATCAGTTCACAACCTTAATGGTTTGAAGTTGGCAATTATTCTACAAGTGGTTGTAGTTATTTTTCTGGTTTTCCTCTGGAGTTTTCGTTGCCACACCAGATATAGGAGGAGGCGTTCCCGCTGA 594 0.4158 MESYSFHSASFLLLASAVCCFSHPSLLGVHPLDEKYYTSHLIQCKDGSKSFSSDRLNDNFCDCSDGTDEPGTKAYPAGKFYCRNLGSKPQFIVSSHVNDCYCDCCDGSDEYDGTIQCPNTCVMGGNAENMYGNYNSKVSDLGVFSEKETKNGVKSEESVHNLNGLKLAIILQVVVVIFLVFLWSFRCHTRYRRRRSR 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g01979 197 PANTHER N-LINKED OLIGOSACCHARIDE PROCESSING 14 195 IPR039794 -
Car06g01979 197 Pfam Glucosidase II beta subunit-like 17 124 IPR028146 -
Car06g01979 197 PANTHER EXPRESSED PROTEIN 14 195 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g01979 Car-Chr6 19750495 19752479 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g01979 26 127 Calmodulin-binding Proteins AT5G56360 65.049 1.65e-40 143
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g01979 - - gmx:100306278 270.011
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g01979 06 19750495 19752479 Car06g01979 06 19750495 19752479 ECH