Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g01977 ATGGCACAATTGCCACCCAAGATTCCAATTCCAAACATGACACAAACTTGGCCAGAATTTTCTTCACACCAAAAAATGCCTACCCTTAAAACCATGTCACCAAATGTTAATTCAGCACACCAAAACCCTTCATGGGTGGACGAATTTCTCGACTTCTCGTCGGCGAGAAGAGGGGCCCACAGGCGGTCGGCGAGCGACTCAGTGACGTTTGTAGAGGCGTCAATGATGGAGCATTGTCGCCGCAGTGAGTTTGAAAGGTTTGATGATGAACAATTGATGTCGATGTTTAATGACGATGTTTCGGAGAATCCTATGATGTCACAACCACCTGTAGCAGCAGCCACATTGTGTTCTAATTCTAACCCTTCAACTCCTTCTGATAATAACAGCATCAATGATGAGAAAGAGGTGGATGAAAAGCAGCAACATCTAGAATTGAAGCATGAATCAGATGAGGATGAAATTAGTGAATGCAAACAGGAAATTGCTCAAGTTGTCaatgatgatgacaataataataataatTCAAATACAAGTTCAAGTCAGAAAATTACTGACCCCAAAAGGGTCAAAAGAATATTGGCAAATAGACAATCGGCTCAAAGATCAAGAGTTAGGAAGCTGCAATACATATCAGAGCTAGAGCGAAGTGTTACTTCATTACAGGCAGAAGTTTCTGTACTATCTCCAAGGGTTGCATTTTTGGATCATCAGAGGTTGCTTCTAAATGTTGATAACAGTGCTCTCAAGCAAAGAATCGCTGCCCTCGCCCAAGACAAAATCTTCAAAGATGCTCATCAAGAGGCATTGAAAAGGGAGATAGAGAGGCTAAGGCAAGTGTATCACCAACAAAACATCAAGAAGATGGAAAATAATGCTACAGGGTCACCATCACCAAAACCACGATGTGATAATGATACTCACATTGAAAAAGAACATCTTATCAATGTTTGA 954 0.4046 MAQLPPKIPIPNMTQTWPEFSSHQKMPTLKTMSPNVNSAHQNPSWVDEFLDFSSARRGAHRRSASDSVTFVEASMMEHCRRSEFERFDDEQLMSMFNDDVSENPMMSQPPVAAATLCSNSNPSTPSDNNSINDEKEVDEKQQHLELKHESDEDEISECKQEIAQVVNDDDNNNNNSNTSSSQKITDPKRVKRILANRQSAQRSRVRKLQYISELERSVTSLQAEVSVLSPRVAFLDHQRLLLNVDNSALKQRIAALAQDKIFKDAHQEALKREIERLRQVYHQQNIKKMENNATGSPSPKPRCDNDTHIEKEHLINV 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g01977 317 Pfam bZIP transcription factor 188 232 IPR004827 GO:0003700|GO:0006355
Car06g01977 317 SUPERFAMILY Leucine zipper domain 188 242 IPR046347 GO:0003700|GO:0006355
Car06g01977 317 MobiDBLite consensus disorder prediction 165 184 - -
Car06g01977 317 PANTHER BASIC LEUCINE ZIPPER 34 1 312 - -
Car06g01977 317 Coils Coil 267 287 - -
Car06g01977 317 MobiDBLite consensus disorder prediction 131 159 - -
Car06g01977 317 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 186 238 IPR004827 GO:0003700|GO:0006355
Car06g01977 317 MobiDBLite consensus disorder prediction 113 130 - -
Car06g01977 317 SMART brlzneu 184 248 IPR004827 GO:0003700|GO:0006355
Car06g01977 317 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 191 206 IPR004827 GO:0003700|GO:0006355
Car06g01977 317 MobiDBLite consensus disorder prediction 288 307 - -
Car06g01977 317 Gene3D - 187 286 - -
Car06g01977 317 CDD bZIP_plant_RF2 189 239 IPR044759 GO:0003700|GO:0006355
Car06g01977 317 MobiDBLite consensus disorder prediction 113 188 - -
Car06g01977 317 PANTHER BZIP FAMILY TRANSCRIPTION FACTOR 1 312 - -
Car06g01977 317 Coils Coil 141 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g01977 Car-Chr6 19737035 19739953 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g01977 1 265 bZIP Transcription Factor Family AT3G58120 56.507 5.01e-90 268
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Car06g01977 bZIP_2 3.7e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g01977 - - gmx:778128 402.905
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g01977 06 19737035 19739953 Car06g01977 06 19737035 19739953 ECH