Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g01973 atgaggaggagtagtagaggaggagagatagttgaagtagaaggaggaCACATAGTTAGATCAACAGGTAAAAAAGATAGACACAGCAAGGTGTATACATCCAAAGGACCCCGTGATCGAAGGGTTCGTCTCTCAGCACATACAGCCATTGAGTTCTATGATGTTCAAGACCGCCTTGGCTATGACAGACCAAGCAAAGCAGTTGATTGGCTCATCAAGAAAGCTAAGCATTCTATTGACAAGCTTGCTGACCTTCCTCCTTGGCATCCTTCCTCTGATAATCAAACTCAACAACAACAGAATGTTGCTGCAGGATCAACTAGCTTGGTTATTGGAGAACAACAATCTCAATCTAATAGTGGATATAATTTTCATCTCTTAAGACACTTTACTGATAATCAATGTGACAACAATAATTCATCTTTCATTTCACAACATGCTGTTGAAACTGATCCTATACCTTTTTTTCCAACTACTTCTTCTACTTCTCAACCTATCAATTTTCAAACCTACCCTCATCATCATGGAATAATCTCTACAAATAACATTCATTCAACACAAGATCTTGGTCTATCTCTTCATTCATTCCAAGATCATAATGGTTTGATTAATCCTTGGCAATCACAGCAACAGGATTGTCAGAACCATGCAACTTCAAACCAAAACCAAACACTTTTTGCTGGATTTGAGAACCAATATCAGAGAATTGTTAACTGGAACAGTGAAACTACCACTGATTATGTAAAGAAAGTTGGCTTCATGGTAAACTCACAACAATTTCTTCCCCATGGTTCAACTTCAGCTTCAGAATACTCACCAAATGAGACCCTTCAGTCGAACTTTTCGCCTTCGGTTCGATCATGGAATGACATTCCAATGGCTTCTTCAGAGCATCACAGGACAGAACAAGTTCATCAAGCTTCAATATTTGGAAGCAGGTTTGTTTGTGATGGATTAGCAGGGTTCTGTGTTCCTGATACAGTTCAAGGTGATGAAGAGGGTCATGGAGTTTCTTCCAATAGGCCTTCTTCTGCTTCTCCTACTTCTCATCACCATTGA 1059 0.3749 MRRSSRGGEIVEVEGGHIVRSTGKKDRHSKVYTSKGPRDRRVRLSAHTAIEFYDVQDRLGYDRPSKAVDWLIKKAKHSIDKLADLPPWHPSSDNQTQQQQNVAAGSTSLVIGEQQSQSNSGYNFHLLRHFTDNQCDNNNSSFISQHAVETDPIPFFPTTSSTSQPINFQTYPHHHGIISTNNIHSTQDLGLSLHSFQDHNGLINPWQSQQQDCQNHATSNQNQTLFAGFENQYQRIVNWNSETTTDYVKKVGFMVNSQQFLPHGSTSASEYSPNETLQSNFSPSVRSWNDIPMASSEHHRTEQVHQASIFGSRFVCDGLAGFCVPDTVQGDEEGHGVSSNRPSSASPTSHHH 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g01973 352 MobiDBLite consensus disorder prediction 83 107 - -
Car06g01973 352 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 4 351 IPR005333 GO:0003700
Car06g01973 352 MobiDBLite consensus disorder prediction 89 107 - -
Car06g01973 352 ProSiteProfiles TCP domain profile. 24 82 IPR017887 -
Car06g01973 352 PANTHER TRANSCRIPTION FACTOR TCP4 4 351 - -
Car06g01973 352 MobiDBLite consensus disorder prediction 333 352 - -
Car06g01973 352 MobiDBLite consensus disorder prediction 330 352 - -
Car06g01973 352 Pfam TCP family transcription factor 22 128 IPR017887 -
Car06g01973 352 MobiDBLite consensus disorder prediction 263 282 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g01973 Car-Chr6 19707540 19708723 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g01973 8 351 TCP Transcription Factor Family AT1G53230 39.895 4.95e-58 191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Car06g01973 TCP 7.3e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g01973 - - gmx:100814907 382.874
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g01973 06 19707540 19708723 Car01g01999 01 45153723 45155790 ECH
Car06g01973 06 19707540 19708723 Car06g01973 06 19707540 19708723 ECH