Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g01953 ATGATGCATGATTACGATATAGGAGACAAAGTGGAAGTATGCAGCGAAGAAGAAGGTTTTGAAGGTTCATACTTTGAAGCCACAGTTGTTGCATGCATTGAGAATGGAGAATATGCGGTTCGTTACACAAACCTTTTGTCAGATGACGAATCTGCCCCTCTCATTGAAATAGTTAAAGCAAATGAGGTTCGTCCATTACCACCATGTGTTAATCCTCAAGACTTCAATTTCTACCAAAAAGTTGATGCTTTTGATAATGATGGTTGGTGGATAGGATTAATCATTAGTGAGAAAATTGCCACTCAAAATGGTTATTACTATGGGGTGTATTTCCAAAATACCAATGAAACTATTCACTTCCGATTTGATCAAATTAGGGTTCATCATGAGTGGGTTGATGGAGAATGGATCTTGGAAGAATAA 423 0.3735 MMHDYDIGDKVEVCSEEEGFEGSYFEATVVACIENGEYAVRYTNLLSDDESAPLIEIVKANEVRPLPPCVNPQDFNFYQKVDAFDNDGWWIGLIISEKIATQNGYYYGVYFQNTNETIHFRFDQIRVHHEWVDGEWILEE 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g01953 140 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 7 137 - -
Car06g01953 140 SMART agenet_At_2 73 133 IPR014002 -
Car06g01953 140 SMART agenet_At_2 3 71 IPR014002 -
Car06g01953 140 Pfam Agenet domain 8 68 IPR008395 -
Car06g01953 140 PANTHER AGENET DOMAIN-CONTAINING PROTEIN 7 137 - -
Car06g01953 140 Gene3D - 1 82 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g01953 Car-Chr6 19547958 19548579 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g01953 15 131 PHD Transcription Factor Family AT5G58610 25.547 4.10e-11 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g01953 - - cam:101489110 293.893