Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g01952 ATGCGTCCACCAATGAAGAAAGTTGATTACAAAGAAGGAGACAAAGTTGAAGTATGCAGCAAAGAAGAAGGATTCATCGGTTCATACTACGAAGGTACAATTGTTTCGTGTCTTGAAAATGGAAAATATGTTGTTTGTTACAAGAATCTTATAGAAGATGACAATTCTGGTCGTTATCTCAAAGAGACACTTTACCCAAAAGAGCTTCGTCCATTACCGCCACGTGTCCGTAATCCAACCAATTTTAAACGGAATCAGAAAGTGGATGCTTTTGATAACGACGGTTGGTGGTTAGGTGTAATCGCAAGTGAGAAGATGGTTCAACAAAAAATTGATTATTATAAAGTTTATTTCCCTAATTGCAATGAATCCATTTACTATCCTTCTCATCGAATTAGACTTCATCATCAATGGTTTGCTGGACACTGGATCAAGTAA 438 0.3676 MRPPMKKVDYKEGDKVEVCSKEEGFIGSYYEGTIVSCLENGKYVVCYKNLIEDDNSGRYLKETLYPKELRPLPPRVRNPTNFKRNQKVDAFDNDGWWLGVIASEKMVQQKIDYYKVYFPNCNESIYYPSHRIRLHHQWFAGHWIK 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g01952 145 PANTHER - 8 144 - -
Car06g01952 145 SMART agenet_At_2 80 140 IPR014002 -
Car06g01952 145 SMART agenet_At_2 8 77 IPR014002 -
Car06g01952 145 Gene3D - 1 76 - -
Car06g01952 145 Pfam Agenet domain 13 74 IPR008395 -
Car06g01952 145 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 8 144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g01952 Car-Chr6 19543098 19543535 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g01952 20 138 PHD Transcription Factor Family AT5G58610 28.261 3.55e-11 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g01952 - - cam:101489110 317.775