Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g01948 ATGGACTCCATCCACGGAGCTCCGTCTCATCTCACCTCCGCTCCGCCGCGTCCTCCGTCGGTATCGCCGTTTACCGGCCGGGAAGACTGCTGGAGCGAAGATGCTACTTTCACCCTCATCGACGCCTGGGGTGAGCACTATCTTGACCTCAACCGCGGTAATCTCCGCCAGAAACACTGGCAGGAGGTTGCCGATGCCGTCAACGACATCCATGCCGCCGGCAACAACAGGAAAGCGCGCCGAACCGACGTTCAGTGCAAAAACCGAATCGACACGCTTAAAAAGAAGTACAAGATCGAGAAGGCTAGGGTTTCCGAAACCGACGGCGGTTATCAGAGTCCCTGGTCATTCTTCTCCCGCCTCGACGCCCTCATCGGCGATACTTTTCCGATAAAAAAACTCTCGCCGCCGGCAAACGTACGGACGACCCCTGCCGCAGTCAAACCTCCTCCTCTGCCTCCGCCGCCGGCGTGGATAATCTCACATCCGGTTGGTCCCCGATCCGGGACCCAGAAACGTCCGGCACTTGCGAATAGGGACGACGCATCCTTCAGGCGGAATTTCTCGGCCTTCGCGGCTGCTGCTGCTGCGGCGGCAGAAGCAGAAAGCGAGGAGTCGGAGGAATGGAGGTCTAGCAGTGGAACGGGAAGTGGGAAGAAGGGAAAGGAGAGTGATAAGAATTTGGAGTTCGGATTCAGAGAACTAGCTCAGGCCATAGAGAGGTTCGGCGATATATATGAGAGAGTTGAAGATGCGAAACAGAGACAAATGGTTGAATTAGAGAAACAGAGGATGCAATTTGCGAAGGATTTGGAGTTCCAGAGAATGCAGCTATTCATGGAAACGCAGGTTCAGCTTCAGAAAATCAAGCGTTCCAAACGTTCTTCTGGTTCCGCAGACAGTTTATCATAG 912 0.5471 MDSIHGAPSHLTSAPPRPPSVSPFTGREDCWSEDATFTLIDAWGEHYLDLNRGNLRQKHWQEVADAVNDIHAAGNNRKARRTDVQCKNRIDTLKKKYKIEKARVSETDGGYQSPWSFFSRLDALIGDTFPIKKLSPPANVRTTPAAVKPPPLPPPPAWIISHPVGPRSGTQKRPALANRDDASFRRNFSAFAAAAAAAAEAESEESEEWRSSSGTGSGKKGKESDKNLEFGFRELAQAIERFGDIYERVEDAKQRQMVELEKQRMQFAKDLEFQRMQLFMETQVQLQKIKRSKRSSGSADSLS 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g01948 303 Coils Coil 246 266 - -
Car06g01948 303 Gene3D - 31 99 - -
Car06g01948 303 MobiDBLite consensus disorder prediction 140 177 - -
Car06g01948 303 PANTHER SEQUENCE-SPECIFIC DNA BINDING TRANSCRIPTION FACTOR 1 298 - -
Car06g01948 303 MobiDBLite consensus disorder prediction 143 161 - -
Car06g01948 303 MobiDBLite consensus disorder prediction 1 27 - -
Car06g01948 303 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 1 298 IPR044823 -
Car06g01948 303 MobiDBLite consensus disorder prediction 201 225 - -
Car06g01948 303 Pfam Myb/SANT-like DNA-binding domain 28 124 IPR044822 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g01948 Car-Chr6 19486272 19489611 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g01948 205 291 Trihelix Transcription Factor Family AT3G14180 43.678 1.48e-16 77.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Car06g01948 Myb_DNA-bind_4 3.5e-25 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g01948 - - lang:109355153 382.874
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g01948 06 19486272 19489611 Car06g01948 06 19486272 19489611 ECH