Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g01946 ATGTTTCTTTTTCtcatcttcatcataaacatactactcttactaacatcatcatcatcatcaGATCTTCGACCTGGATTTTACTCATATACATGTCCACAAGCTGAAACCATTGTAAAAAATGTCATGAAAAAAGCTCTTTTAAGAGAACCCAGAAGTCTTGCCTCTGTTATGCGCTTTCAATTTCATGATTGCTTTGTTAATGGGTGTGACGCTTCTATGTTGCTTGATGATACACCAAGTATGATAGGAGAGAAATTAGCTCTTTCGAATATAAATTCGCTTAGATCATATGAAGTTATTGATGAGGTTAAGGAGGCTTTAGAGAAGGCTTGTCCAGGTGTTGTTTCTTGTGCTGATATCATAATCATGGCTTCTAGAGATGCTGTAGCACTGACAGGAGGACCTGAGTGGGAGGTAAGACTAGGAAGATTGGATAGCTTGACAGCTAATCAAGAAGACTCAAACAATATAATGCCAAGTCCAAGAGCCAATGCAAGCACTCTGATCAACCTCTTCAAGAAATACAACCTCTCTGTGAAAGACCTTGTAGCACTCTCAGGATCTCACTCGATCGGGAAAGGTCGTTGTTTTTCGATAATGTTCAGACTATACAATCAATCCGGTAGTGGAAAGCCTGACCCTGCTATTGATCTTGGTTTCAGAAAAGAGCTTAACAAACTATGTCCACTAGATGTTGATCAAAATGTGACAGGGAAGCTTGATTCAACTCCTGTGGTTTTTGATAACCAATATTTTAAGGATTTGGTTGCTGGAAGAGGATTTCTGAACTCTGATCAAACACTTTTCACTTTCCCTAAAACAAGAGGGTTTGTGAGTTTGTATAGTAAAGATCAAACTGAGTTTTTCAAAGCATTTGTAGAAGGGATGTTGAAAATGGGTGACTTGCAGTCTGGTCGACCTGGTGAAGTTAGGAGGAATTGCAGAGTCGTTAATGCTCATTTCCTTTCTCAACACAAGAAGATGCATAATAATGATAAATCTATGTAA 1011 0.3689 MFLFLIFIINILLLLTSSSSSDLRPGFYSYTCPQAETIVKNVMKKALLREPRSLASVMRFQFHDCFVNGCDASMLLDDTPSMIGEKLALSNINSLRSYEVIDEVKEALEKACPGVVSCADIIIMASRDAVALTGGPEWEVRLGRLDSLTANQEDSNNIMPSPRANASTLINLFKKYNLSVKDLVALSGSHSIGKGRCFSIMFRLYNQSGSGKPDPAIDLGFRKELNKLCPLDVDQNVTGKLDSTPVVFDNQYFKDLVAGRGFLNSDQTLFTFPKTRGFVSLYSKDQTEFFKAFVEGMLKMGDLQSGRPGEVRRNCRVVNAHFLSQHKKMHNNDKSM 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g01946 336 CDD secretory_peroxidase 24 318 IPR033905 GO:0004601|GO:0042744
Car06g01946 336 ProSiteProfiles Plant heme peroxidase family profile. 22 319 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car06g01946 336 PANTHER PEROXIDASE 72-RELATED 11 321 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car06g01946 336 Gene3D - 26 319 - -
Car06g01946 336 PRINTS Plant peroxidase signature 32 51 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car06g01946 336 PRINTS Plant peroxidase signature 56 76 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car06g01946 336 PRINTS Plant peroxidase signature 96 109 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car06g01946 336 PRINTS Plant peroxidase signature 115 125 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car06g01946 336 PRINTS Plant peroxidase signature 134 149 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car06g01946 336 PRINTS Plant peroxidase signature 181 193 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car06g01946 336 PRINTS Plant peroxidase signature 239 254 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car06g01946 336 PRINTS Plant peroxidase signature 255 272 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car06g01946 336 PRINTS Plant peroxidase signature 295 308 IPR000823 GO:0004601|GO:0006979|GO:0020037
Car06g01946 336 PANTHER PEROXIDASE 17 11 321 - -
Car06g01946 336 Pfam Peroxidase 39 285 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car06g01946 336 ProSitePatterns Peroxidases proximal heme-ligand signature. 182 192 IPR019793 -
Car06g01946 336 Gene3D Peroxidase, domain 2 160 300 - -
Car06g01946 336 PRINTS Haem peroxidase superfamily signature 54 68 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car06g01946 336 PRINTS Haem peroxidase superfamily signature 116 133 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car06g01946 336 PRINTS Haem peroxidase superfamily signature 134 146 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car06g01946 336 PRINTS Haem peroxidase superfamily signature 182 197 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car06g01946 336 PRINTS Haem peroxidase superfamily signature 241 256 IPR002016 GO:0004601|GO:0006979|GO:0020037
Car06g01946 336 SUPERFAMILY Heme-dependent peroxidases 23 319 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g01946 Car-Chr6 19456698 19458462 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g01946 1 319 Peroxidase AT2G22420 72.414 8.66e-180 499
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g01946 K00430 - gmx:100796737 537.339