Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g01944 ATGTTGAAGCAACTAATTGTCACATTGGTTAAAGGATTGAACACAAATCCAGCAGCAATGATCAAGAAGATAGCTGGATTAGTTTCTGATTTTTATAAGCGACCAAATGTAGAAAGTCCAGCAAAAGCTGCACTTGAGGAATCCTCCCACATGTTTGAGAGTCGTGGTGTCCAGATGCTGGGGCAAATAAGGCATGGTTCATGCCGTCCTCGAGCTATCTTATTTAAAGTTCTATCAGATACTGTAGGTCTTGAAAGTAGGCTTATGATGGGTTTTCCAACTGATGGAGCTGCTGATTGTGTAGACTCATACAAGCATATGTCTGTGATAGTTGTGTTAAATTCTGTGGAACTGCTGGTTGATCTCATGCGCTTTCCTGGCCAACTGTTACCACGATCAATCAAGTCAATTCTTATGACACACATTTCTGCAGCGGGAGAGAGTGATTCGGCAGAAAATGATTCTTGTGATTCACCATTAGAACCAAACAGTCCTTTATATGGGGTTTCAGATAGTGCTGAAAAAGATGAGAATCTCCAATTCCATAGAAGATTTGAAACATCTTCAAATATTTCAGGTCTTCCCTTGCGAAATATGATGTTACGATCAAATACCAGTTTGGACAGGAAATTAAGCTTGTCTCATAGTGAACCCAACATTGCAACTTCAATTGGTCGGCGTAGTCGAAGAAAGGTCATTGCTGAACAGAGGACCGCTAGCTCAAGTCCAGAACATCCATCATTTCAAGCTCGTGGACAGTCTAAGCTTGGCGGTGGCAAGACTGCATTTAGAGATTTTGCTGATGACCAGGCTACATCAAGATCCAGCTATAAGTCAGATGGTGCATCCTCATCAGAAGCTCGTAGGATACGAAGAAGAAGCATCAGTATAACACCAGAGATCGGTGATGATATTGCAAGGGCTGTGCGGGCAATGAATGAAAAACTAAAGCAAAATCGTCTTCTAAGGGAACAAGAGGATGATAGTTCATTGTCTCACTCTCCCAATGATCGAATTAGTAGTGAAGAGCTTCAGAAAAATCTGTCAAATTTTCGCCTTGATGATCAAAATGAAAGGTCCCCCTTATATCCGCTGCACCGCGACAACGTAACTTCTCATAAGGCAATGTCATTACCCTCTTCACCACATGATTATCGAGGACAAACTTCCGAGACAAGCAGGCCGTCGGGATATGAAATAGGTGATGAACTGGAGTCGACTTGGAATAAAATCCTTGAATCATCAATGTCCAATAATAAACCTCTGTTACCATATGAAGAGTGGAATATTGATTTCTCAGAATTGACAGTTGGAACTCGTGTTGGGATTGGGTTCTTTGGTGAAGTTTTCCGTGGCACATGGAATGGCACAGATGTTGCAATCAAGGTTTTCCTAGAGCAAGATTTAACTGCTGAAAACATGGAAGATTTCTGCAATGAGATATCTATTCTCAGCCGACTTAGACATCCTAATGTCATCTTATTTCTTGGTGCATGCACAAAGCCTCCACGCTTGTCAATGGTGACCGAATATATGGAAATGGGATCTTTGTTCTACTTGATTCATGTGAGCGGTCAAAAGAAGAAGCTTAGTTGGCGAAGAAGACTAAAGATGTTACGGGACATATGCAGTAGGGGCTTGATGCATATACATCGAATGAAGATTATTCACCGTGATGTGAAAAGTGCGAATTGCCTGGTGGATAAGCATTGGACAGTGAAAATCTGTGATTTTGGACTTTCGAGAATAGTAACAGATTCTCCCATGAGAGATTCTTCTTCAGCTGGAACGCCAGAATGGATGGCTCCTGAACTGATTCGAAATGAACCGTTCACTGAAAAATGTGATATCTTTAGCCTAGGGGTGATAATGTGGGAGCTATGCACTTTGAATAGGCCATGGGAAGGCGTACATCCAGAGAGGGTGGTTTATGCTGTTGCTAATGAGGGTTCCAGATTAGAGATTCCTGAAGGCCCGCTAGGCCGGCTGATTGCAGAGTGTTGGGCAGAACCTCATGAGCGTCCAAGTTGTGAGGAGATCCTATCTCGTTTGGTAGACATAGAGTACTCAATGTCCTGA 2079 0.4247 MLKQLIVTLVKGLNTNPAAMIKKIAGLVSDFYKRPNVESPAKAALEESSHMFESRGVQMLGQIRHGSCRPRAILFKVLSDTVGLESRLMMGFPTDGAADCVDSYKHMSVIVVLNSVELLVDLMRFPGQLLPRSIKSILMTHISAAGESDSAENDSCDSPLEPNSPLYGVSDSAEKDENLQFHRRFETSSNISGLPLRNMMLRSNTSLDRKLSLSHSEPNIATSIGRRSRRKVIAEQRTASSSPEHPSFQARGQSKLGGGKTAFRDFADDQATSRSSYKSDGASSSEARRIRRRSISITPEIGDDIARAVRAMNEKLKQNRLLREQEDDSSLSHSPNDRISSEELQKNLSNFRLDDQNERSPLYPLHRDNVTSHKAMSLPSSPHDYRGQTSETSRPSGYEIGDELESTWNKILESSMSNNKPLLPYEEWNIDFSELTVGTRVGIGFFGEVFRGTWNGTDVAIKVFLEQDLTAENMEDFCNEISILSRLRHPNVILFLGACTKPPRLSMVTEYMEMGSLFYLIHVSGQKKKLSWRRRLKMLRDICSRGLMHIHRMKIIHRDVKSANCLVDKHWTVKICDFGLSRIVTDSPMRDSSSAGTPEWMAPELIRNEPFTEKCDIFSLGVIMWELCTLNRPWEGVHPERVVYAVANEGSRLEIPEGPLGRLIAECWAEPHERPSCEEILSRLVDIEYSMS 692
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g01944 692 MobiDBLite consensus disorder prediction 373 396 - -
Car06g01944 692 MobiDBLite consensus disorder prediction 268 283 - -
Car06g01944 692 SUPERFAMILY Protein kinase-like (PK-like) 410 684 IPR011009 -
Car06g01944 692 MobiDBLite consensus disorder prediction 235 249 - -
Car06g01944 692 Gene3D Phosphorylase Kinase; domain 1 428 513 - -
Car06g01944 692 MobiDBLite consensus disorder prediction 207 223 - -
Car06g01944 692 Gene3D Transferase(Phosphotransferase) domain 1 514 691 - -
Car06g01944 692 ProSitePatterns Serine/Threonine protein kinases active-site signature. 555 567 IPR008271 GO:0004672|GO:0006468
Car06g01944 692 Coils Coil 305 325 - -
Car06g01944 692 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 48 690 - -
Car06g01944 692 MobiDBLite consensus disorder prediction 207 291 - -
Car06g01944 692 Pfam Ethylene-responsive protein kinase Le-CTR1 1 129 - -
Car06g01944 692 Pfam Protein tyrosine and serine/threonine kinase 436 684 IPR001245 GO:0004672|GO:0006468
Car06g01944 692 ProSiteProfiles Protein kinase domain profile. 435 689 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car06g01944 692 PANTHER MAP KINASE KINASE KINASE-LIKE PROTEIN 48 690 - -
Car06g01944 692 MobiDBLite consensus disorder prediction 320 399 - -
Car06g01944 692 ProSitePatterns Protein kinases ATP-binding region signature. 441 462 IPR017441 GO:0005524
Car06g01944 692 SMART serkin_6 435 685 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car06g01944 692 CDD STKc_MAP3K-like 441 684 - -
Car06g01944 692 MobiDBLite consensus disorder prediction 148 171 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g01944 Car-Chr6 19432186 19444744 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g01944 3 691 MAP Kinase Kinase Kinase AT3G58640 70.504 0.0 995
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-1 Car06g01944 PK_Tyr_Ser-Thr 3e-60 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g01944 - - gmx:100807193 1222.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g01944 06 19432186 19444744 Car06g01944 06 19432186 19444744 ECH