Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g01933 ATGGCCAGCACCAGCAATAATAGTATCACTCAAAGCAGCAACAGCTCTTCATCTCTAAGGAGAAATTATTATGACGTGTTTATCACCTTCAGAGGTAAAGACACACGCTACAACTTCACTGATCAACTTTTTAATGCTCTCCAAAGAAAGGGCATTTTTGCATTTAGGGATGACACTAATCTTCCAAAAGGTGAATCTATAGCACCCGAGCTCCTTCAAGCAATCCAAGTCTCACAGATTTTTGTTGTGGTACTTTCTAAGAACTATGCTTCATCAACTTGGTGCTTGCGAGAATTGGAGTATATCCTTCTTCACTGCCGTCAACAACCGACAAAACATATTCTGCCTGTTTTCTATGATGTTGATCCTTCGGAGGTGAGATATCAAAAAGAAGGGGACTATGAAAAAGCCTTTGTCAAACACGAACAAAGATTCCAACAAGACTATAATATGGTCCAACGATGGAGAGAAGCTCTCACACAAGTAGCTAATCTCTCTGGTTGGGACATACATGATAAGCCACAATTTGCACAGATTGAAAAGATCGTTAAACAGATTATAAATATATTGAGTTACAATTTTTCTAGTCTTCCAAAAGATTTAGTTGGGACGGATTCTCCTATTGAAGAATTGGAAAAGTGTTTACTTTTGGACTCGATTGATGATGTCCGGATTGTAGGAATTAGTGGAATGGGAGGAATAGGGAAGACAACCCTTGCTACTGTTCTATACAACAAAATCTCTCACCAATTTCCTGTGTACTGCCGTATTGCTGATCTGAGCAAAATTTATAGGCATGATGGTCCAATCGGTGCACAAAAGCAAATTCTACTTCAAACTCTAGGCGAAGAATACCTTCAAACATGCAATCTTCACAACGCATCTAACTTGATACAAAATAGGCTATGTCGTGAAAAGGCCATTATAATTATTGACAATGTTGATCAAATTGAACAACTCGAGAAATTAGATGTGAGGCGTGAATGGTTAGGTGCAGGGAGTAGAGTCGTTATAATTTCTAGAGATGAGCATATCTTGAAAGAGTATGGAGTGGATGTTGTGTACAAAGTTCCACTCTTGAATAAGTCTGACTCGCTTCAATTCTTTTGTCGAAAAGCTTTCAAACTTGATCATATTATGAGTAGTTATGATAAGGTTGCATTTGACATACTAAGGTATGCTAATGGCCTACCACTGGCAATTAAAGTATTGGGCTCATTTTTGTTTGGTCGAAATATCCCTGAATGGGAAAGCGCGTTGGCAACATTGAGAGAAAGTCCAAACGAAGATATCATGGATGTGTTGCGGTTAAGTTTTGATGGGCTGGAAAAAATGCAAAAGGAAATATTTCTTCATGTTGCTTGTTTTTTCAATGGGTGTAAGGAGAAACATGTTAAGAATGTTCTAAATTGTTGTGGATTCCATCCTGATATTGGATTAAGAGTTCTAATTGATAAATCACTTATAAACATTTCAGCATCAGATAAAATTGAAATACATGGTTTGTTAGAAGAGTTGGGCAGAAAAATTGTTCAAGAAGATTCAATCAACGAGTCAAGAAAATGGAGCAGGGTGTGGATCTACGAACAATTCTACAATGTTATGTTGGAGAATATGGAAAAGAAGGTTGAAGCCGTATGTTTTGTTAGAGAGGAAAGAAAAAAGAAAATATTGATCAAGGATGAAATATTGATCAAGGATGAAACATTGTCAAAAATAAGTCATCTTAGAATGCTCATACTCAAAGGAGTGACTTTTTCAGGAAACATCACGTGTCTTTCTAGCGAGTTAAGATATCTAGAGTGGGATAGATATCCTTTCAAGTATTTGCCATCAAGTTTTCGTCCCAACCAACTTGTTGAATTAAACTTGAGGAATAGCAACGTCAAACAACTGTGGAAAGACAAGAAGTATTTGCCCAATTTGAGAATTTTGGATTTGGGCTACTCAAAAAATCTAAGAAAGATGCCAGATTTTGGAGAGATCCCAAATCTTGAGGTGCTAGATCTTGAAGGATGTGTAAAACTGGAGCAGATGGATCCATCTATTGGGGTTCTAAGAAAGCTTGTTTTCTTAAATTTGAAATATTGCAAAAATCTAGCAAGCATACCCAACAACATATTTGGTATGAGCTCCATCAAATGTTTATATCTTCCGGGGTGTCCCAAAGTGTTTAAGAATTCATGGCAATTGAAAAAGCCTAATTCAAGTGAAATTTCCTCACATTCCTTGTATCACAAAGATTTAACTGGTTGTTTGCGGCCTTCCTTGCTTAGCTTATATTGTTTGCGTGAAGTTGATGTTAGTTTTTGCGGTCTAAGCCAACTCCCCGATGCAATTGGATGTCTACATTGGCTAGAAGGATTAAATTTAGGAGGAAACAATTTTGTGACAGTACCTAGTCTGAGGGAGCTTTCCAAACTTGTATATTTAAACTTGGAGCATTGCAAACTGTTGGAATCTTTGCCTGAGCTTCCTTTTCATACTGCTAATATCGATCACAATCTTCATATTAACTTATATGAGAATATAAAAGGATTGGTCATTTTCAACTGTCCTAAATTGGGTGAGAGGGAACGTTGCAGTATCATGGCATTTTCATGGATGATACAATTCATTCAGGCAATCCAAGAATCATCTACCTCTGTTGATTGGATTGATATTGTAATTCCAAAAAGTGAAATACCAAGTTGGTGCAACAATCAGAGTGAGGGTAATTCAATAAGAATAGACTCGTCTCCCATTTCTTATGACAATAACAACCATATCATTGGCATTGCTTGTTGTGCTGTATTTTCCGTTGCACCTGGTAATCCAACTACCACAACAAATGCAAAAAGAACCCAAATAAAGCTAGATTTTACTAATTGTAATACTAACTGGTGGTGGAATGGCATCGTTCCAGTAATTCTTGAAAGAGAACTTGTTGCGGTCAAATCAGATCACATGTGCCTAATGTATTTCCCTCTGGAATCATTCGTTAATATTCTCAAGTTTGTAGACAAAACTCTCATGCATCTGGATATGAAAGTTTTTGTTATTAAGAACAACAAAGGTCTGGATCTGGAGGTGCAGAGCTGTGGATATTGTTGGATATATAAACAAGATCTACAACTGATGCATGCATCGCTGCAGAAATTTCGTAGCTCGGAAGTGCAAGTTTTTGGCAATTGA 3174 0.3708 MASTSNNSITQSSNSSSSLRRNYYDVFITFRGKDTRYNFTDQLFNALQRKGIFAFRDDTNLPKGESIAPELLQAIQVSQIFVVVLSKNYASSTWCLRELEYILLHCRQQPTKHILPVFYDVDPSEVRYQKEGDYEKAFVKHEQRFQQDYNMVQRWREALTQVANLSGWDIHDKPQFAQIEKIVKQIINILSYNFSSLPKDLVGTDSPIEELEKCLLLDSIDDVRIVGISGMGGIGKTTLATVLYNKISHQFPVYCRIADLSKIYRHDGPIGAQKQILLQTLGEEYLQTCNLHNASNLIQNRLCREKAIIIIDNVDQIEQLEKLDVRREWLGAGSRVVIISRDEHILKEYGVDVVYKVPLLNKSDSLQFFCRKAFKLDHIMSSYDKVAFDILRYANGLPLAIKVLGSFLFGRNIPEWESALATLRESPNEDIMDVLRLSFDGLEKMQKEIFLHVACFFNGCKEKHVKNVLNCCGFHPDIGLRVLIDKSLINISASDKIEIHGLLEELGRKIVQEDSINESRKWSRVWIYEQFYNVMLENMEKKVEAVCFVREERKKKILIKDEILIKDETLSKISHLRMLILKGVTFSGNITCLSSELRYLEWDRYPFKYLPSSFRPNQLVELNLRNSNVKQLWKDKKYLPNLRILDLGYSKNLRKMPDFGEIPNLEVLDLEGCVKLEQMDPSIGVLRKLVFLNLKYCKNLASIPNNIFGMSSIKCLYLPGCPKVFKNSWQLKKPNSSEISSHSLYHKDLTGCLRPSLLSLYCLREVDVSFCGLSQLPDAIGCLHWLEGLNLGGNNFVTVPSLRELSKLVYLNLEHCKLLESLPELPFHTANIDHNLHINLYENIKGLVIFNCPKLGERERCSIMAFSWMIQFIQAIQESSTSVDWIDIVIPKSEIPSWCNNQSEGNSIRIDSSPISYDNNNHIIGIACCAVFSVAPGNPTTTTNAKRTQIKLDFTNCNTNWWWNGIVPVILERELVAVKSDHMCLMYFPLESFVNILKFVDKTLMHLDMKVFVIKNNKGLDLEVQSCGYCWIYKQDLQLMHASLQKFRSSEVQVFGN 1057
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g01933 1057 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 193 452 IPR027417 -
Car06g01933 1057 SMART till_3 23 165 IPR000157 GO:0007165
Car06g01933 1057 Pfam TIR domain 24 188 IPR000157 GO:0007165
Car06g01933 1057 Gene3D - 359 443 IPR042197 -
Car06g01933 1057 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 758 1039 IPR044974 GO:0006952
Car06g01933 1057 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 198 726 IPR044974 GO:0006952
Car06g01933 1057 PANTHER REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED 758 1039 - -
Car06g01933 1057 PANTHER REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED 198 726 - -
Car06g01933 1057 Gene3D Ribonuclease Inhibitor 732 855 IPR032675 -
Car06g01933 1057 Gene3D Ribonuclease Inhibitor 559 731 IPR032675 -
Car06g01933 1057 SUPERFAMILY L domain-like 570 869 - -
Car06g01933 1057 PRINTS Disease resistance protein signature 225 240 - -
Car06g01933 1057 PRINTS Disease resistance protein signature 301 315 - -
Car06g01933 1057 PRINTS Disease resistance protein signature 394 408 - -
Car06g01933 1057 PRINTS Disease resistance protein signature 660 676 - -
Car06g01933 1057 SUPERFAMILY Toll/Interleukin receptor TIR domain 14 168 IPR035897 -
Car06g01933 1057 SUPERFAMILY "Winged helix" DNA-binding domain 430 534 IPR036390 -
Car06g01933 1057 Pfam C-JID domain 890 1037 IPR045344 -
Car06g01933 1057 ProSiteProfiles TIR domain profile. 22 190 IPR000157 GO:0007165
Car06g01933 1057 Gene3D - 188 354 IPR027417 -
Car06g01933 1057 Gene3D - 21 187 IPR035897 -
Car06g01933 1057 Pfam NB-ARC domain 208 429 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g01933 Car-Chr6 19280705 19285471 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g01933 24 843 WRKY Transcription Factor Family AT4G12020 27.857 6.28e-77 276