Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g01917 ATGGCCACCTTCATTTTAAGGTCTAATAAACTAGTCCATGCATTGAGCTTGTTTTGTCTCATGCTAATGATTCAAAAGGGTGATGCCTATGATTTCATAGTTGGAGGCCAAAAGGGTTGGAGTGTTCCAAGTGATTCCAATATCAATCCTTTCAATCAATGGGCTGAAAAGAGCCGTTTTCAAATAGGAGACTCCCTAGTGTTCAACTACCAATCTGGCCAAGACTCAGTGCTTTATGTAAAGAGTGAAGACTATGCAAGTTGCAACACTGCTTCACCTTATGCAAAATTCTCTGATGGTCACACACTCATCAAACTCAACCAATCAGGACCTCATTTCTTCATCAGTGGAAACAAAGACAACTGTCTCAAAAATGAGAAGGTAACAGTGATTGTGCTGTCTGACAGGAGCAACAGCAGCAGCAACAACAGCAGCAACAACAACAACTCATCAAACAATGCTTCTCCACCTTCACCACAATCATCATCATCATCACCTCCTTCACCAGCACCTGCTAACCAAGATGGTCAATCTCCACCTCCAGACACAAACCAAACACCATCTCCTACTACTAGTGATAAAGGACACCCTCCTCGAAATGGTGCTGCTTCATTCTGTGTTAGCTTAGCTGGTTCTGTTGGAACATTCATGGCTTCAGTTTTAATTTTATCTAAGTATATATGA 684 0.4167 MATFILRSNKLVHALSLFCLMLMIQKGDAYDFIVGGQKGWSVPSDSNINPFNQWAEKSRFQIGDSLVFNYQSGQDSVLYVKSEDYASCNTASPYAKFSDGHTLIKLNQSGPHFFISGNKDNCLKNEKVTVIVLSDRSNSSSNNSSNNNNSSNNASPPSPQSSSSSPPSPAPANQDGQSPPPDTNQTPSPTTSDKGHPPRNGAASFCVSLAGSVGTFMASVLILSKYI 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g01917 227 ProSiteProfiles Phytocyanin domain profile. 30 134 IPR003245 GO:0009055
Car06g01917 227 MobiDBLite consensus disorder prediction 135 159 - -
Car06g01917 227 CDD OsENODL1_like 30 133 IPR041846 -
Car06g01917 227 MobiDBLite consensus disorder prediction 160 186 - -
Car06g01917 227 Pfam Plastocyanin-like domain 40 124 IPR003245 GO:0009055
Car06g01917 227 SUPERFAMILY Cupredoxins 29 133 IPR008972 -
Car06g01917 227 MobiDBLite consensus disorder prediction 135 201 - -
Car06g01917 227 PANTHER PLASTOCYANIN-LIKE DOMAIN PROTEIN 5 224 - -
Car06g01917 227 Gene3D - 30 149 IPR008972 -
Car06g01917 227 PANTHER BLUE COPPER PROTEIN 5 224 IPR039391 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g01917 Car-Chr6 19125137 19126389 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g01917 11 180 Phytocyanin Superfamily AT3G20570 47.674 3.04e-52 166
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g01917 - - gmx:100792916 300.827