Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g01907 ATGACATTGTTGCAAAGGAAATATGACGTGTTTGTGAGCTTCAGAGGTGAAACTCGCCATAATTTCATTGATCATCTCTTTGGTGCCCTCCGAAGAAAAAACATTTATGCATTCAGGGATGATACGAACATTAGAAAAGGTGAATCCATTGCACCTGAGCTTCTTCGCGCAATCGAAGCCTCTCAGATTTTCATTGTGGTTTTCTCTAAGAACTATGCTTCCTCAACATGGTGTTTGCGAGAATTGGAATACATCCTTTTTCATTGCAGTCAACCACCGATTAAACGCGTTCTTCCTGTTTTCTATGATGTTGATCCTTCTGATGTCCGAAAGCAAAGTGGAGATTATGAAAAAGCCTTTGCTGAACATGAAAAAAACATCAATCTGGACTTACAAATGTTGCAAAGATGGAGGCTAGCTGTCACACAAGCGGCCTTTCTCAATGGATGGGATCTACATGATAAGCGACAATATGCAGCAATTGAACTGATTGTTCAAGAGATAATAGATACATTTGGTTACAAATTTTCATATCTTCCAAATAATTTAGTTGGGATGTTTTCTCCTATAGAAGATTTGGAAAAATGTTTACTTTTGGACTCCGTTGATGATGTTAGGGTTGTGGGAATTTGTGGGATGGGTGGATTAGGGAAGACAACTCTTGCTTCTGTTTTATACGGAAAAATCTCTCATCAATTTGATGCATGTTGTTTTATTGATGATGTAAGCAACATTTTTAGATATCACGGTCCAATTGGTGCACAAAAGCAAATCCTACGTCAAACTCTAGGGGAAGAACACAATCAGATGTACAATCTTTACGTAGGAACAAATTTGATACAAACTAGACTATGTCATCGGAGGGCTCTTATAATTTTTGATAATGTTGATCACAATGAACAATTGGAGAAACTAGCCGTGAATCGTAAATCGTTAGCTGCAGGGAGTAGAATCATTATAGTTTGTAGAGATGCTCATATCTTGGAAGAGTATGGAGTGGACGCACTTTACAAAGTTCCACACTTGAATGACACAAACTCTCTTCAATTATTTTGTCGAAAAGCTTTCAAACGTGATAAGATTATCAGTGATTATGAGGAGTTGACATATGACATATTAAATTATGCTGGTGGTCTACCACTTGTCATTAAAGTGTTAGGTTCATTTTTGTCCGGCCGAAGTATATCTGAATGGAGAAGTGCATTGACTAGATTGAGAGAAAGTCCAAACAAAGATGTTATGGATGGATTGCAGTTTAGTTTTTATGGTCTAGAGAAAATGGAATTACAAATATTTTTTGATATTGCTTGTTTTTTCAACAGGTGTGAGGAAAAATTTGTTAAAAATGTTTTAAACATTTGTGGATTTCATCCTGATATTGGATTAAGAGTTCTTGTTGATAAATCACTTATAAGCATTTCAGAAGACAGTAAGATTGAAATGCACTGTATGCTGGAAAAGCTAGGTAGAAAAATTGTTCATGAAAATTCAACTGAAGAGTCAAGAAAGTGGAGTAGGTTGTGGCTCCATAAACACTGCTACGATGTTATGTCAGAGAATATGGAAAAGAATGTTGAAGCCATAGTTTTGAATGGAAATGAAGGAGATACAGAAATATTGACGGTTGAGGCATTGTCAAATATGAGTCGTCTTAGATTGCTCATACTCAAAGATGTTAAATTTTTAGGAAGCCTTAGCAATCTTTCTAATCAATTAAGATATGTTTCATGGGATGGATATCCTTTCATGTATTTCCCATCAAGTTTTGAGCCCAATCAACTTGTTGAATTGGTCTTGGTGAATAGCAACATGAAACAACTATGGGAAGGAAAAAAGAATCTGCCCAAGTTGAGGACTCTTGATCTAAGCTACTCCAAAAATTTAATCAAGATTCCAGATTTTGAAGAGGTCCCAAATCTTGAGCGGTTAAACCTTGAAGGATGTGTAACACTTGTGCAGATGGATGTATCTATTAGTCTTCTAAAGAAGCTTGTTTTCTTGAATTTGAAAAATTGCAAAAGACTTACATGCATACCCAACAGAATAAATGGTCTCAACTCTCTTGAATATTTAAATCTTTGCTATTGTTCTGAAGCATTTAACAATCCAATCCATTCGGGGTTGCCTTCCTTGGCTAGCTTAAATGGTTTGCGTGAACTTGATATTAGTTTTTGTGGTCTAAGCCAACTCCCTGATACTATAGGATGCCTATGTTTTTTACAAAGATTAAATTTAGCGGGAAACAATTTTGTGACACTACCTAGCCTCAGGGAGCTTTCCGAACTTGTATATATGAACTTGGAGCATTGCAAGCAGTTGAAATCTTTTCCCGAACTTCCTTCACCTGTTGCTATCAAGCACGACAAATATTGGAGAGCGGGGATGCATATTTTCAACTGTCCTGAATTGGGCGAGAGGGAACGCTGCAGTAACATGACTTTTTCATGGATGATGCAATTCGTTCTAGCAAACCAAGAATCCTCTGCCTCTTTTCGTTGGATTGAAATTGTTGTTCCAGGAAGCGAAGTACCAAGCTGGTTCGACAATCAAAGAGTTGGTAGATCAATACGCATAAACCCATTCTTCATTATGGTTGACAATGATGTCATTGGCATTGTTTGTTGTGTAGTTTTTTCTGCTGCATCTCATGATCCAACAACATTTGGACAGAAACCTGTCTTACTTCTATGTTTTCATAAAAGTGATCTGAAGCTTCATTTTAGCATTACTGTAAATACAAAGCTTATCATGGTCCAATCAAATCACATGTGGCTAACCTATTTCACTCGGGAATCGTTCTTTGATATTCTGAAAGGTATAGGCAATGAAGTCGGCGATTGTATCAGAATGGAAGCTTCAATTGTAGACGCCGAAGGTTTGGATGTGGAGGTGAAGAGTTGCGGGTATCGTTGGGTATTTAAACAAGATCCCCTAATCAACTTAATAACCATACAACCGGAAACTCAGTAG 2970 0.371 MTLLQRKYDVFVSFRGETRHNFIDHLFGALRRKNIYAFRDDTNIRKGESIAPELLRAIEASQIFIVVFSKNYASSTWCLRELEYILFHCSQPPIKRVLPVFYDVDPSDVRKQSGDYEKAFAEHEKNINLDLQMLQRWRLAVTQAAFLNGWDLHDKRQYAAIELIVQEIIDTFGYKFSYLPNNLVGMFSPIEDLEKCLLLDSVDDVRVVGICGMGGLGKTTLASVLYGKISHQFDACCFIDDVSNIFRYHGPIGAQKQILRQTLGEEHNQMYNLYVGTNLIQTRLCHRRALIIFDNVDHNEQLEKLAVNRKSLAAGSRIIIVCRDAHILEEYGVDALYKVPHLNDTNSLQLFCRKAFKRDKIISDYEELTYDILNYAGGLPLVIKVLGSFLSGRSISEWRSALTRLRESPNKDVMDGLQFSFYGLEKMELQIFFDIACFFNRCEEKFVKNVLNICGFHPDIGLRVLVDKSLISISEDSKIEMHCMLEKLGRKIVHENSTEESRKWSRLWLHKHCYDVMSENMEKNVEAIVLNGNEGDTEILTVEALSNMSRLRLLILKDVKFLGSLSNLSNQLRYVSWDGYPFMYFPSSFEPNQLVELVLVNSNMKQLWEGKKNLPKLRTLDLSYSKNLIKIPDFEEVPNLERLNLEGCVTLVQMDVSISLLKKLVFLNLKNCKRLTCIPNRINGLNSLEYLNLCYCSEAFNNPIHSGLPSLASLNGLRELDISFCGLSQLPDTIGCLCFLQRLNLAGNNFVTLPSLRELSELVYMNLEHCKQLKSFPELPSPVAIKHDKYWRAGMHIFNCPELGERERCSNMTFSWMMQFVLANQESSASFRWIEIVVPGSEVPSWFDNQRVGRSIRINPFFIMVDNDVIGIVCCVVFSAASHDPTTFGQKPVLLLCFHKSDLKLHFSITVNTKLIMVQSNHMWLTYFTRESFFDILKGIGNEVGDCIRMEASIVDAEGLDVEVKSCGYRWVFKQDPLINLITIQPETQ 989
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g01907 989 ProSiteProfiles TIR domain profile. 6 172 IPR000157 GO:0007165
Car06g01907 989 PANTHER REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED 180 698 - -
Car06g01907 989 PANTHER REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED 715 981 - -
Car06g01907 989 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 715 981 IPR044974 GO:0006952
Car06g01907 989 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 180 698 IPR044974 GO:0006952
Car06g01907 989 SUPERFAMILY L domain-like 539 781 - -
Car06g01907 989 Gene3D - 4 175 IPR035897 -
Car06g01907 989 Gene3D - 341 425 IPR042197 -
Car06g01907 989 Gene3D Ribonuclease Inhibitor 515 698 IPR032675 -
Car06g01907 989 SUPERFAMILY Toll/Interleukin receptor TIR domain 5 150 IPR035897 -
Car06g01907 989 PRINTS Disease resistance protein signature 207 222 - -
Car06g01907 989 PRINTS Disease resistance protein signature 283 297 - -
Car06g01907 989 PRINTS Disease resistance protein signature 376 390 - -
Car06g01907 989 PRINTS Disease resistance protein signature 612 628 - -
Car06g01907 989 SUPERFAMILY "Winged helix" DNA-binding domain 413 516 IPR036390 -
Car06g01907 989 Pfam TIR domain 7 150 IPR000157 GO:0007165
Car06g01907 989 Gene3D - 176 335 IPR027417 -
Car06g01907 989 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 177 435 IPR027417 -
Car06g01907 989 Pfam C-JID domain 838 976 IPR045344 -
Car06g01907 989 SMART till_3 7 147 IPR000157 GO:0007165
Car06g01907 989 Pfam NB-ARC domain 200 410 IPR002182 GO:0043531
Car06g01907 989 Gene3D Ribonuclease Inhibitor 699 787 IPR032675 -
Car06g01907 989 ProSiteProfiles Leucine-rich repeat profile. 739 760 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g01907 Car-Chr6 18993529 18997232 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g01907 6 778 WRKY Transcription Factor Family AT4G12020 30.265 5.87e-86 302
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g01907 - - cam:101502375 1999.56