Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g01900 ATGGGAATTCAGAGATATATGGTTGACATAAGGTTTAGTTTTTGTGTTCTTTTAGTTCTTGTTGTAGCAGCAGATAGCTTTATAGAAAAGGAAACACAGGATGGTTTTGTTAGAGAAGTACTTGATTCAGCATCTGGATTGTTAGATGAGCACACGGCAAAGGTATTAAGGACCCCTTGCTGTGAATATTTTATTCATTTCAAGAAAAAGAATGAATATCATGATTTATGTTTCCCACTGGAATTGTTTACTAGCAACAATAAAGTCAGTTCCACCGTTCGACCATTTGCACAAGCAGACATCCGAAAATTGCTTAATGCTTGTGATCCACAAATCAAGGAAAGCTTTCTTCAATGTTTGAGAAAAAATATTCTTGAGGATGATTCCAAGACATTGCGTGTCACTGGTACAAGATATCTTTTTTCCACATCTCGTATTCCCAGAAGAATTCCGGGCCGTGTTTTGCTCCAGCATATATCAGAACCGCCTAGTTCAGGCCCTGCAGTTGGATCACCTACACCGAGTCTCGCTCCATCACCTGAACCCAGTCTATCCCCATCGCCTGCTCCAGTGCCTCTTCTTCCTAGCCTTCTGTCTCCTCCTTCGTCACCAGTCCCGTTTTTCCCAAAACTGACACCACCAGCAGCTGCAGAGATTTCTGCTCCTCCATCTCCTTACACTAACAGGGAGGAAGACGAGCATAGTAATAAAACAACAGTTGTTGTTGCTGTAGTTTTAACTACATCGTTGATATTTTTAGCTGCAGCAGTGTTCTTTTTATGCTGTAGTCGATTTCGTAAGACTGGACGGCTTAGACAAAATGATGACAGGCCCCTTCTCAGCTTGAGCATGAATGACTATTCTTATGGTCCTTCCAATCACACTTTTGGAAATTCACCAAAAGGGGAGAAAATCGGGTTTCAGTCATCAAGTAATAATAATTTAGGAGACAACAAGAAGACATCGTCAATGCACGAAAATCAATCGATAGGATCTCTTACTTCTACCGGATCACCATTCGAATTGAAACCTCCTCCTGGGAGAGTTGGGACTAACAATTCTGGAATGCCACCTTTAAAACCTCCTCCAGGAAGGATGAATCCTTTTCCCCCTGAGCCGCCTACATTTAGGCCTTTCGGTAATACTGCTGTCCTCACTGCTGCTGCACCTCTTCCTCCTCTAGGACCTCGACAGTCCGATGTTGGTAGTGCTCCACCTCCTGCTGCTCCTTCACTACCACACTCGACGCTAGCTGGTGCCAAACCTGGTCCTCCTCCTCCACCGCCCCCAGCACCACATGGGGCTAAACCCAGTGGTCCTCCTCCTCCACCACCCCCAGCACCACATGGGGCTAAACCCGGTCCTCCTCCTCCACCACCCCCAGCACAACATGGGGCTAAACCCGGtcctcgtccacctccacctcctcctAAGAGTGGGGTAGCTCCTCCTCGACCATCAACAGGATCAAAGGTGGATCGACCTTCAGCTAGTGGACCAAAAGCTACAATGGATGCTGAAGCAGGTGCAGAAGGTGGAGCTGATGCTCCTAAAGCCAAACTAAAGCCATTTTTCTGGGATAAGGTTCAAGCTAATTCAGATCAATCGATGGTTTGGAATCAGATCAAATCAGGATCATTCCAGTTTAATGAAGAGATGATAGAGACACTTTTTGGTTATAATGCTGTAAACAAAAACAATGGTCAACAACAGAAGGAGTCTTCCTCCCTAGACCCTTCACCCCAATATATCCAGATCATTGACAAAAAGAAATCACAAAATTTATTAATTCTGTTGCGAGCATTGAATGTGACAATGGAAGAAGTTTGTGATGCACTCTATGAAGGAAATGAGCTACCGTCAGAATTCCTTCAAACCTTGCTGAAGATGGCGCCGACATCAGACGAAGAACGTAAACTTAAACTTTATAGTGGTGATCTGTCTCAACTTGGGCCCGCGGACCGTTTCCTGAAAGCCCTGGTTGACATTCCCTTTGCCTTCAAGCGAATGGAAACACTGCTTTTTATGGGTACATTTAAAGAGGAACTCACTACAACTATGGAGTCTTTTGCAGTTTTAGAGGTTGCTTGTAAGGAATTAAGAAACAGCCGGCTGTTCCTGAAGCTTCTTGAAGCCGTTCTCAAAACCGGAAACCGAATGAATGACGGAACATACCGTGGTGGTGCACAAGCTTTTAAACTTGATACACTTTTGAAATTATCTGACGTAAAAGGAACAGATGGCAAGACTACACTCTTACACTTCGTTGTTCAAGAGATTATTCGCTCTGAGGGCATTAAAGCTGCTCGAGCGGCAAAAGAGAGCCAGAGTTTGTCCAATATTAAAACGGATGAGCTTCTTGAAGATAACGCGCGTGAAACTGAAGACCACTACCGGGAACTTGGTCTTGAGGTGGTTTCACACTTGAGCAGTGAGCTCGAGAATGTTAAAAAAGGATCTATTCTAGATGCTGACAGTTTATCGGCAACTGCTACCAAACTTGGCCATGGTCTTGTGAAAGCCAAAGACTTACTGAACAAAAACCTGAAGAACGTGGACGAAGACAGAGGGTTTCGTGAGACAGTGGAAAATTTTGTCCAGAAAGCCGAGGCTAATGTTAAGAAACTGCTAGAAGATGAGAAGAAAATCATGGCTCTGGTGAAGAGCACTGGCGATTACTTTCATGGGAACACTGGGAAGGACGATGGCTTGCGATTGTTCATTGTAGTAAGAGACTTCTTAATAATGCTTGATAAAGTATGCAAGGAGGTGAGAGATGCACAGAAGAAGCCAGCGAAACCTCTTAAACAAGAAACTTCACGAGGAACATCTTCATCTGATACACGTCCTCCACCTTCTGATTTTCGTCAGCGGCTTTTTCCAGCTATAGCTGAAAGAAGGGTAGATGACATCAGTTCAGATGATGAGAGTTCATAG 2937 0.4389 MGIQRYMVDIRFSFCVLLVLVVAADSFIEKETQDGFVREVLDSASGLLDEHTAKVLRTPCCEYFIHFKKKNEYHDLCFPLELFTSNNKVSSTVRPFAQADIRKLLNACDPQIKESFLQCLRKNILEDDSKTLRVTGTRYLFSTSRIPRRIPGRVLLQHISEPPSSGPAVGSPTPSLAPSPEPSLSPSPAPVPLLPSLLSPPSSPVPFFPKLTPPAAAEISAPPSPYTNREEDEHSNKTTVVVAVVLTTSLIFLAAAVFFLCCSRFRKTGRLRQNDDRPLLSLSMNDYSYGPSNHTFGNSPKGEKIGFQSSSNNNLGDNKKTSSMHENQSIGSLTSTGSPFELKPPPGRVGTNNSGMPPLKPPPGRMNPFPPEPPTFRPFGNTAVLTAAAPLPPLGPRQSDVGSAPPPAAPSLPHSTLAGAKPGPPPPPPPAPHGAKPSGPPPPPPPAPHGAKPGPPPPPPPAQHGAKPGPRPPPPPPKSGVAPPRPSTGSKVDRPSASGPKATMDAEAGAEGGADAPKAKLKPFFWDKVQANSDQSMVWNQIKSGSFQFNEEMIETLFGYNAVNKNNGQQQKESSSLDPSPQYIQIIDKKKSQNLLILLRALNVTMEEVCDALYEGNELPSEFLQTLLKMAPTSDEERKLKLYSGDLSQLGPADRFLKALVDIPFAFKRMETLLFMGTFKEELTTTMESFAVLEVACKELRNSRLFLKLLEAVLKTGNRMNDGTYRGGAQAFKLDTLLKLSDVKGTDGKTTLLHFVVQEIIRSEGIKAARAAKESQSLSNIKTDELLEDNARETEDHYRELGLEVVSHLSSELENVKKGSILDADSLSATATKLGHGLVKAKDLLNKNLKNVDEDRGFRETVENFVQKAEANVKKLLEDEKKIMALVKSTGDYFHGNTGKDDGLRLFIVVRDFLIMLDKVCKEVRDAQKKPAKPLKQETSRGTSSSDTRPPPSDFRQRLFPAIAERRVDDISSDDESS 978
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g01900 978 MobiDBLite consensus disorder prediction 960 978 - -
Car06g01900 978 Pfam Formin Homology 2 Domain 515 917 IPR015425 -
Car06g01900 978 PANTHER FORMIN-RELATED 1 976 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Car06g01900 978 MobiDBLite consensus disorder prediction 419 483 - -
Car06g01900 978 MobiDBLite consensus disorder prediction 161 188 - -
Car06g01900 978 MobiDBLite consensus disorder prediction 292 339 - -
Car06g01900 978 MobiDBLite consensus disorder prediction 167 188 - -
Car06g01900 978 ProSiteProfiles Formin homology-2 (FH2) domain profile. 511 943 IPR015425 -
Car06g01900 978 PANTHER FORMIN-LIKE PROTEIN 1 976 - -
Car06g01900 978 MobiDBLite consensus disorder prediction 937 952 - -
Car06g01900 978 Coils Coil 859 886 - -
Car06g01900 978 SUPERFAMILY Formin homology 2 domain (FH2 domain) 581 943 - -
Car06g01900 978 MobiDBLite consensus disorder prediction 926 978 - -
Car06g01900 978 Gene3D Formin, FH2 domain 516 948 IPR042201 -
Car06g01900 978 MobiDBLite consensus disorder prediction 292 517 - -
Car06g01900 978 MobiDBLite consensus disorder prediction 356 377 - -
Car06g01900 978 SMART it6_source 511 932 IPR015425 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g01900 Car-Chr6 18943971 18950689 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g01900 220 969 FH2 protein (formin) Gene Family AT5G54650 53.646 0.0 644
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g01900 - - gmx:100776210 1014.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g02128 01 46860505 46866076 Car06g01900 06 18943971 18950689 PCT