Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g01887 ATGAGTTTCATTACTTATATTCTACTTGTCTTTTTTCTTATAGTTTCCAATTCCATAGCTGGTGATGATACATCATGCATTACTCAATCTCAATCTATTAGTGATGGAAAGACCATTGTTTCCCCAAAAGGATTATTTGAGCTTGGTTTTTTCAGTATCAAAAATCCCAACAAACGATACCTCGGAATTCGATTCAAGAATATTTCATCTCAAAATGTTGTTTGGGTTGCAAATGGTGGCCAACCAATCAACGACTCTTCTGCCATTTTGAAACTAAACAGTTCTGGCAGTTTGGTTCTTAGTGCTCACAACAACATTGTTTGGTTCACAAATTCTTCCACAAAAGCACAGAAACCAGTTGCACAACTCTTGGATACTGGCAATCTTGTCATAAGAGATAAAGTTGGTGAAACCTATCTGTGGCAAAGCTTTGACTACCCATCTAATACATTATTGTCAGGTATGAAATTGGGATGGGACCTCAAAAGAAATCTGAGTAGGCGTCTGATAGCATGGCAGAGTGATGATGATCCAACCCCAGGAAACTTTTCATGGGGTGTTGTATTGAATCCATATCCAGATATCTATATGATGAAGGGAAGAGATAAGTACCATAGACTTGGACCATGGAATGGCTTGCGTTTTAGTGGTATGCCAGAGATGAAGCCTAATCCTGTTTTCAATTACAACTTTGTCTCCAATAAAGAAGAGGTTTATTACACATGGAGCTACAATGATAGTTCTCTAATATCAAAAGTTGTACTTAACCAAACAAGCAACGGACGTCCTCGCTATGCATGGTCAAAAGAGGACGAATTATGGATGCTTCATTCAAGAATGCCAGGAGACTATTGTGACTATTATGGTTTATGTGGAGTCAATGGATATTGCAGCAGTACTAATTCACCAGTATGTGAATGTTTAAAAGGGTTCAAGCCAAAGTTTCCTGAAAAATGGAAGTCAATGGACTGGCGCGAAGGATGTGAAAGGAATCATTCATTGAACTGCATCAATGATGGATTTGTCTCAGTTGCAAACTTGAAAGTTCCAGATACTACAAATACTTCAGTGGATGAGAGTATTGGTCTAGAACAATGCAGAGACAAATGCTTGAAAAATTGTTCATGCATGGCTTATACAAATACAAATATAAGTGGAGCAGGCAGTGGCTGTGTTATGTGGTTAGGTGATCTAATGGATATTAAACTTTTCCCAGTTGGTGGGCAAGTTCTATACATCAGGATGCCTGCTTCTGAATTAGATGAGGATGGACACAAGAAGAACTGGAGAAAAATAGTTGTAATTTCTGTCTCTGCAGCTTTGGGAATGCTTTTACTTGCTATTTATTTTTTCTACAGATTCTGGAGGACCATTACTGGGAAGTCAAAGACAGAAGATAACTATGAAAGACACGTGGACGATCTGGATCTTCCCTTGCTTAATTTGTCAACAGTTATTACTGCAACTGACAACTTCTTAGAGAAGAACAAAATTGGAGAAGGTGGTTTTGGACCTGTTTATCGGGGAAAATTAGGGAGTGGACTAGAAATTGCTGTGAAGAGACTTTCACAGAGCTCAAGACAAGGGGTGAAAGAGTTCATAAATGAAGTAAAACTTATTGCAAATGTTCAACACCGAAATCTTGTAAAGCTTATTGGTTGTTGCATTCAGAGACAAGAAAAAATGCTAGTTTATGAATACATGGCTAATGGTAGCCTAGACTACTTCATTTTTGAACGTACCAATGGCCAATTACTAGATTGGCCAAAGCGTTTccacataatttgtggaattgctagggggcttatgtatcttcatcaagactctagattaaggattgtccatagagatctcaaaacaagtaatgttttactagatgatactttgaatccaaaaatatcagattttggaatggctagaatttttggaggagaCCAAATTGAAGGAAACACAAATAGAATTGTTGGGACATATGGATACATGGCACCAGAATATGCCATTGATGGACAATTTTCTGTGAAATCCGACGTTTTCAGCTTTGGTATTTTACTCTTAGAGATTATATGCGGGAAGAAGAATAGAGTGCGTAATCGTACAAAGCAAACCCTTAACCTTGTTGCTTATGCATGGACTTTCTGGAAACATGAAAGAGAATTACAAATAATTGACTCAAACATAGAGGATTCATGCGTTGTATCTGAAGTGTCACGTTGCATCCATGTTGGACTGTTATGCGTGCAACAATACCCAGAGGATAGGCCTACCATGGCTGATGTGATTTTAATGTTAGGGAGTGAGATGACATTGGATGAGCCTAAAGAGCCAGGTTTTATTACAAGGAAGGAATCTATTGAAGCAAATTCAAGCTCAAGTGGGAAAGATATTAGTTCAAACTATGCAATGAGCATAACCTCTTTAAGTGTTCGGTGA 2430 0.3572 MSFITYILLVFFLIVSNSIAGDDTSCITQSQSISDGKTIVSPKGLFELGFFSIKNPNKRYLGIRFKNISSQNVVWVANGGQPINDSSAILKLNSSGSLVLSAHNNIVWFTNSSTKAQKPVAQLLDTGNLVIRDKVGETYLWQSFDYPSNTLLSGMKLGWDLKRNLSRRLIAWQSDDDPTPGNFSWGVVLNPYPDIYMMKGRDKYHRLGPWNGLRFSGMPEMKPNPVFNYNFVSNKEEVYYTWSYNDSSLISKVVLNQTSNGRPRYAWSKEDELWMLHSRMPGDYCDYYGLCGVNGYCSSTNSPVCECLKGFKPKFPEKWKSMDWREGCERNHSLNCINDGFVSVANLKVPDTTNTSVDESIGLEQCRDKCLKNCSCMAYTNTNISGAGSGCVMWLGDLMDIKLFPVGGQVLYIRMPASELDEDGHKKNWRKIVVISVSAALGMLLLAIYFFYRFWRTITGKSKTEDNYERHVDDLDLPLLNLSTVITATDNFLEKNKIGEGGFGPVYRGKLGSGLEIAVKRLSQSSRQGVKEFINEVKLIANVQHRNLVKLIGCCIQRQEKMLVYEYMANGSLDYFIFERTNGQLLDWPKRFHIICGIARGLMYLHQDSRLRIVHRDLKTSNVLLDDTLNPKISDFGMARIFGGDQIEGNTNRIVGTYGYMAPEYAIDGQFSVKSDVFSFGILLLEIICGKKNRVRNRTKQTLNLVAYAWTFWKHERELQIIDSNIEDSCVVSEVSRCIHVGLLCVQQYPEDRPTMADVILMLGSEMTLDEPKEPGFITRKESIEANSSSSGKDISSNYAMSITSLSVR 809
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g01887 809 Gene3D - 20 144 IPR036426 -
Car06g01887 809 CDD STKc_IRAK 498 763 - -
Car06g01887 809 CDD B_lectin 30 147 IPR001480 -
Car06g01887 809 SUPERFAMILY Protein kinase-like (PK-like) 475 763 IPR011009 -
Car06g01887 809 SMART serkin_6 492 763 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car06g01887 809 Gene3D Phosphorylase Kinase; domain 1 456 567 - -
Car06g01887 809 CDD PAN_AP_plant 328 416 - -
Car06g01887 809 ProSitePatterns Serine/Threonine protein kinases active-site signature. 613 625 IPR008271 GO:0004672|GO:0006468
Car06g01887 809 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 32 807 - -
Car06g01887 809 SMART ntp_6 336 415 IPR003609 -
Car06g01887 809 Pfam S-locus glycoprotein domain 206 315 IPR000858 GO:0048544
Car06g01887 809 ProSiteProfiles EGF-like domain profile. 281 317 IPR000742 -
Car06g01887 809 ProSiteProfiles PAN/Apple domain profile. 336 417 IPR003609 -
Car06g01887 809 Pfam D-mannose binding lectin 73 173 IPR001480 -
Car06g01887 809 Pfam PAN-like domain 337 401 IPR003609 -
Car06g01887 809 ProSiteProfiles Protein kinase domain profile. 492 769 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car06g01887 809 SMART blect_4 30 147 IPR001480 -
Car06g01887 809 PIRSF SRK 1 809 IPR024171 GO:0004674
Car06g01887 809 Pfam Protein tyrosine and serine/threonine kinase 495 760 IPR001245 GO:0004672|GO:0006468
Car06g01887 809 ProSiteProfiles Bulb-type lectin domain profile. 24 144 IPR001480 -
Car06g01887 809 Gene3D Transferase(Phosphotransferase) domain 1 568 775 - -
Car06g01887 809 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 32 807 - -
Car06g01887 809 SUPERFAMILY alpha-D-mannose-specific plant lectins 73 178 IPR036426 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g01887 Car-Chr6 18847409 18851106 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g01887 432 794 Receptor kinase-like Gene Family AT4G23190 49.185 1.54e-120 374
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Car06g01887 PK_Tyr_Ser-Thr 1.3e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g01887 - - mtr:MTR_4g081750 1140.56