Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g01885 ATGGATCAGAAAAATGTGCAAAACCAAAGTATGCGTTTGGTTCTTTCTACCGATGCTAAGCCTAGGCTAAAATGGACTCCTGAACTTCACCAACGATTTGCTGAGGCAATTCACCAGCTAGGAGGTGCAGAAAAAGCTACCCCAAAAAGTCTGATGAGGGCGATGGGGATTCCGGGACTGACTTTGTACCATCTCAAGAGCCATTTACAGAAATATAGACTTGGCAAAAGCCAACTGCTAGAAACCTGTTCTGACAACAAACAAGATTACGTAGAGATCCAGAGCAGTGATAGTCAATGCAGCAGGGAAATCAGTGTTGAAAATCAGAATCAAACCAGCGAAAGCTTGAAGATTTCTGAGGCTCTCCAAATACAAATGGAAGTACAAAAGAAACTATATGAACAAATTGAGGTGCAGAAACATTTGCAATTTAGAATTGAAGCTCAAGGAAAGTACTTACAATCAGTACTAATGAAAGCACAAGAAGCACTTGCAGGATACAGTTCTTCTTCGACGGTCGGCGTAGAGCATGCTAAAGCTGAACTTTCTCAATTATTATCAATAATCAACAATGCATGTCCTAGTTCTCCTATTTCAGAACTAACAGAAACAAGAGGTTTGAGTTTGAACTTTGGGGAAAGGAAACAAAATAGAGGAACTATGTGTTCTTTGGAAAGTTCTTTGACATCATCTGAAAGTTCTGAGAGAAAAGATGAAAAACATTTCATAAATGAGGCAGAGAATATTCCAAATTGTAATAGTGTTTCAGTTGAATTGCCACTATTGGCCATTCATCCAGAAGATGAAGGTAGTGGGAGAAAGAGAAGTGCAGAAACTGATTTTGATGATAGTTGTGTTGATCAACCAGAAGGAAAAAGATGTGCTAAAAAATTGAGGAAATTTGAGTTGTCACAAATGCTTGACTTAAACAGCAAATATGAGAGGGATATTGATTCATGTTCATCAGAAATAGATTTAAATTGCAGTTCAAGCTTTTAA 999 0.3784 MDQKNVQNQSMRLVLSTDAKPRLKWTPELHQRFAEAIHQLGGAEKATPKSLMRAMGIPGLTLYHLKSHLQKYRLGKSQLLETCSDNKQDYVEIQSSDSQCSREISVENQNQTSESLKISEALQIQMEVQKKLYEQIEVQKHLQFRIEAQGKYLQSVLMKAQEALAGYSSSSTVGVEHAKAELSQLLSIINNACPSSPISELTETRGLSLNFGERKQNRGTMCSLESSLTSSESSERKDEKHFINEAENIPNCNSVSVELPLLAIHPEDEGSGRKRSAETDFDDSCVDQPEGKRCAKKLRKFELSQMLDLNSKYERDIDSCSSEIDLNCSSSF 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g01885 332 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 5 332 IPR044848 GO:0003700
Car06g01885 332 Pfam MYB-CC type transfactor, LHEQLE motif 117 162 IPR025756 -
Car06g01885 332 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 20 75 IPR006447 GO:0003677
Car06g01885 332 MobiDBLite consensus disorder prediction 267 289 - -
Car06g01885 332 Pfam Myb-like DNA-binding domain 22 73 IPR001005 -
Car06g01885 332 Gene3D - 19 77 - -
Car06g01885 332 SUPERFAMILY Homeodomain-like 19 75 IPR009057 -
Car06g01885 332 PANTHER MYB-LIKE TRANSCRIPTION FACTOR FAMILY PROTEIN 5 332 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g01885 Car-Chr6 18839421 18840897 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g01885 11 322 G2-like Transcription Factor Family AT1G69580 50.311 9.28e-83 252
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Car06g01885 Myb_DNA-binding 9.3e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g01885 - - gmx:100805252 462.996
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g01885 06 18839421 18840897 Car06g01885 06 18839421 18840897 ECH