Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g01878 ATGGAGAGCAATACAAGCTCTGAACTCCCTCCTGGCTTTAGATTTCATCCAACAGATGAAGAATTAATTGTTTATTACCTTGGTAATCAAGCTACATCAAAGCCATGCCCTGCATCTATCATTCCAGAAGTTGATATCTATAAATTTGATCCTTGGGAATTGCCTGATAAATCTGAATTTGAAGAGAATGAATGGTATTTCTTTAGTCCAAGAGAAAGAAAGTACCCAAATGGAGTGAGGCCTAATAGAGCAACTTTGTCTGGATATTGGAAGGCTACTGGCACAGACAAACCAATCAATAGTGGATCAAAGCATATTGGGGTGAAGAAATCTTTGGTCTTTTACAAGGGTAGACCACCAAAGGGTATCAAAACTAATTGGATTATGCACGAGTACAGATTGGTTGGATCACAAAAACAAACTAGCAAGCATATTGGATCCATGAGGCTAGATGACTGGGTTTTGTGTAGAATCTATAAGAAGAAGCACATGGGAAAAACATTGCAGCAAAATGAGGACTATCCAACACTTCAATTTACTGATTCTACAATAGTATCAAATAATGATGGGGAACAAGAAACCATGAACCTTCCAAGGACTTGTTCACTTACTTATCTTTTGGATATGAATTACTTTGGTCCAATCTTATCTGATGGCTCAACCTTTGATTTTCAAATCAACAATTCAAATATTGGAATAGACCCTTTTGTAAAACCTCAACCGGTGGAAATGACTAACCATTTTTATGAAGCAGATTCAAGGAAGTACTAA 771 0.3684 MESNTSSELPPGFRFHPTDEELIVYYLGNQATSKPCPASIIPEVDIYKFDPWELPDKSEFEENEWYFFSPRERKYPNGVRPNRATLSGYWKATGTDKPINSGSKHIGVKKSLVFYKGRPPKGIKTNWIMHEYRLVGSQKQTSKHIGSMRLDDWVLCRIYKKKHMGKTLQQNEDYPTLQFTDSTIVSNNDGEQETMNLPRTCSLTYLLDMNYFGPILSDGSTFDFQINNSNIGIDPFVKPQPVEMTNHFYEADSRKY 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g01878 256 Pfam No apical meristem (NAM) protein 10 134 IPR003441 GO:0003677|GO:0006355
Car06g01878 256 Gene3D NAC domain 18 165 IPR036093 GO:0003677|GO:0006355
Car06g01878 256 ProSiteProfiles NAC domain profile. 9 161 IPR003441 GO:0003677|GO:0006355
Car06g01878 256 PANTHER BNAC06G30680D PROTEIN 1 231 - -
Car06g01878 256 PANTHER NAC TRANSCRIPTION FACTOR 56 1 231 - -
Car06g01878 256 SUPERFAMILY NAC domain 5 161 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g01878 Car-Chr6 18726320 18728138 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g01878 1 223 NAC Transcription Factor Family AT1G69490 66.383 1.26e-112 323
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Car06g01878 NAM 1.7e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g01878 - - gmx:100785110 404.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g01878 06 18726320 18728138 Car06g01878 06 18726320 18728138 ECH