Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g01874 ATGGGTAGGTCTCCTTGCTGTGAGAAAGTTGGATTGAAGAAAGGACCATGGACTCCTGAGGAAGACCAAAAACTGATTGCTTACATTGAAGAATTTGGTCATGGAAGCTGGCGTGCATTGCCTTCCAAAGCTGGACTTCAAAGATGTGGAAAGAGCTGCAGACTGAGGTGGACTAACTACCTCCGACCTGACATTAAAAGAGGAAAGTTCAGCCTGCAGGAAGAGCAAACCATCATCCAACTTCACGCCCTTCTTGGAAACAGATGGTCAGCCATAGCAGCTCAACTTCCAAGGAGAACAGACAACGAAATAAAAAACTATTGGAACACACATCTCAAGAAAAGGCTAACAAGAATGGGTATAGACCCCACAACTCACAAGCCTAAAACAGACACACTCGGCTCTTCATCGTCGGCTTCTCACTACTCCAAGGACTCGGCTAATCTCAGCCACATGGCTCAATGGGAAAGTGCTCGTTTAGAAGCTGAAGCTAGACTCGTTAGAGAAACAAACAAGCTGAAAGTTCAAAAACAGCTGGAATCCTCTACAGCGCAACCACCTGCACGCCTTTTTCTCAACAAAATCACACCCATCCAACCATCACTTCCACCTTGTCTTGATATCCTTAAAGCATGGCAAAGTTCATGGTCCAAACCAAAAGATGAAAACAGCAACAACAAAATGCATAGTATGTATGCTATGATGTTATCCAATGATGAAAATCTAGAATCACCAACATCCACTTTGAACTTCCCTGGAACAACCTTGCTTcctcttcctcttcctgtcactgtccctgtcccCACCATGACCACCAATAACGTTGTTCCGTTCAATCAAAATAATAATTTATTACTTCCTCTAACTGACACCACCATTAATAATGATGAGGAAGAGATATGGAAAAATTTCAATTTACCAAAACAGAACATGATGGAAGGTGGTGATAATGATGACAACAATAATATGTTGAACTTGCAGCAAGATGATGATATTATGGCGGCTGTGGAAGCTTTTAGATCTTCTTGTGGTGGATTTGACAATACTATCCCCATTTCTAGTACAACTATTTCCACAAATGTTGTTCTTGAGGGTGAGGAAAACTTGGCAATGATGAATGGGGAAGGAAACATTATTTGCAACGTGAATCTCGAAGAGAATAAGCATTATTGGAATAGTATACTGGGATTGGTCAGTGATGAAATGAGCATGGTTCTATAA 1221 0.4013 MGRSPCCEKVGLKKGPWTPEEDQKLIAYIEEFGHGSWRALPSKAGLQRCGKSCRLRWTNYLRPDIKRGKFSLQEEQTIIQLHALLGNRWSAIAAQLPRRTDNEIKNYWNTHLKKRLTRMGIDPTTHKPKTDTLGSSSSASHYSKDSANLSHMAQWESARLEAEARLVRETNKLKVQKQLESSTAQPPARLFLNKITPIQPSLPPCLDILKAWQSSWSKPKDENSNNKMHSMYAMMLSNDENLESPTSTLNFPGTTLLPLPLPVTVPVPTMTTNNVVPFNQNNNLLLPLTDTTINNDEEEIWKNFNLPKQNMMEGGDNDDNNNMLNLQQDDDIMAAVEAFRSSCGGFDNTIPISSTTISTNVVLEGEENLAMMNGEGNIICNVNLEENKHYWNSILGLVSDEMSMVL 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g01874 406 CDD SANT 69 112 IPR001005 -
Car06g01874 406 CDD SANT 16 61 IPR001005 -
Car06g01874 406 MobiDBLite consensus disorder prediction 118 143 - -
Car06g01874 406 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Car06g01874 406 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Car06g01874 406 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 363 401 - -
Car06g01874 406 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 365 - -
Car06g01874 406 PANTHER MYB TRANSCRIPTION FACTOR MIXTA-LIKE PROTEIN 363 401 - -
Car06g01874 406 PANTHER MYB TRANSCRIPTION FACTOR MIXTA-LIKE PROTEIN 1 365 - -
Car06g01874 406 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Car06g01874 406 Coils Coil 152 172 - -
Car06g01874 406 MobiDBLite consensus disorder prediction 128 143 - -
Car06g01874 406 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Car06g01874 406 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Car06g01874 406 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Car06g01874 406 Gene3D - 11 67 - -
Car06g01874 406 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Car06g01874 406 SMART sant 66 114 IPR001005 -
Car06g01874 406 SMART sant 13 63 IPR001005 -
Car06g01874 406 Gene3D - 69 116 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g01874 Car-Chr6 18679875 18681537 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g01874 1 263 MYB Transcription Factor Family AT3G01140 61.423 1.93e-109 323
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Car06g01874 Myb_DNA-binding 9.4e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g01874 K09422 - gmx:100809025 476.092
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g01874 06 18679875 18681537 Car06g01874 06 18679875 18681537 ECH