Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g01872 ATGGCTACTACCATCTTCTCTGGAGGTTCAGTTTCTCCATTCCATTTTCACAGCAAGAGTACATCTTTAACAGCCAAAGTTCCAATTCTTCAGCTGAAGAGACCTTTCATTACAAAATCAATAGCTTCTCTTGGAACTGAGACATCACTCTCTCCAGCAGTTCAAACCTTCTGGAAGTGGCTTCAGGAAGAAGGCGTCATCACTAAGAAGACACCAGTGAAGGCTAGTGTGGTCCCAGAAGGTCTTGGATTGGTTGCACTCAAAGACATTTCTAGGGATGATGTTGTTTTGCAGGTACCAAAGAGGCTTTGGATAAATCCAGATGCAGTTGCAGCTTCAGAGATTGGGAATGTTTGCAGTGGTTTGAAACCATGGTTGGCTGTGGCACTCTTTCTCATAAGAGAAAGGTCAAAAAGTGATTCTGTTTGGAAGCATTACTTCGGTATTCTGCCACAGGAAACTGATTCCACTATATATTGGTGGGTTTCTTTTGATTGGTATATACTACTAAGACAGtCAGGTACTCAACTTCTGAACACAACATTGTCTGTGAAAGAATATGTGAAGAATGAATTTATGAAACTGGAAAAAGATATCATTCTCCCTAATAAGCGGCTTTTTCCTTCTCCTGTAACACTGGATGAATTCTTATGGGCATTTGGAATTCTCAGATCAAGGGCATTTTCTCGCCTTCGCAATGAAAATCTAGTTGTAATTCCACTGGCAGACTTGATTAACCACAGTGCCAGAGTAACTACAGAGGATCATGCTTATGAAATTAAAGGAGCAGCTGGCCTTTTCTCTTGGGATTACCTATTTTCCTTAAGGAGCCCCCTTTCTGTCAAGGCTGGAGAACAGGTGTATATCCAATATGATTTAAACAAAAGCAATGGAGAGTTGGCTATGGACTACGGTTTCATTGAACCTAATGCGGATCGAAATGCATACACGCTAACATTGAATATATCTGAGTCAGACCCTTTTTATGGTGACAAACTAGACATTGCCGAGTCCAATGGTTTTGGTGAAACAGCATACTTTGACATCTTCTACAATCGCCCTCTTCCACCAGGGTTGCTTCCATATCTGAGACTAGTAGCACTAGGGGGTACCGACGCTTTCTTGTTGGAATCTCTGTTCAGAGACTCCATCTGGGGTCATCTCGAGTTGTCTGTGAGCCGTGACAATGAGGAGCTGGCCTGTAAATCTGCCCTTGCTGGTTATCATACAACCATTGAGCAGGATCGCAAGTTGAAAGAAGCAAATCTAGATTCAAGGCTTGCAATAGCAGTTGGAATAAGAGAAGGGGAAAAGACGGTTCTGCAGCAAATCGATGAGTTCTTCGAGCAAAAAGAATTGGAACTGGACCAGTTAGAATATTATCAAGAAAGGAGGCTCAAGGATCTTGGACTTTGTGGCGAAAATGGTGATATCCTTGGAGACCTCGGAAAATTCTTCTAA 1461 0.4223 MATTIFSGGSVSPFHFHSKSTSLTAKVPILQLKRPFITKSIASLGTETSLSPAVQTFWKWLQEEGVITKKTPVKASVVPEGLGLVALKDISRDDVVLQVPKRLWINPDAVAASEIGNVCSGLKPWLAVALFLIRERSKSDSVWKHYFGILPQETDSTIYWWVSFDWYILLRQSGTQLLNTTLSVKEYVKNEFMKLEKDIILPNKRLFPSPVTLDEFLWAFGILRSRAFSRLRNENLVVIPLADLINHSARVTTEDHAYEIKGAAGLFSWDYLFSLRSPLSVKAGEQVYIQYDLNKSNGELAMDYGFIEPNADRNAYTLTLNISESDPFYGDKLDIAESNGFGETAYFDIFYNRPLPPGLLPYLRLVALGGTDAFLLESLFRDSIWGHLELSVSRDNEELACKSALAGYHTTIEQDRKLKEANLDSRLAIAVGIREGEKTVLQQIDEFFEQKELELDQLEYYQERRLKDLGLCGENGDILGDLGKFF 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g01872 486 PANTHER UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE 35 477 - -
Car06g01872 486 CDD SET_RBCMT 70 307 IPR044431 GO:0016279|GO:0018022
Car06g01872 486 Pfam Rubisco LSMT substrate-binding 324 441 IPR015353 -
Car06g01872 486 ProSiteProfiles Plant LSMT protein-lysine methyltransferase family profile. 4 484 IPR011192 GO:0009507|GO:0030785
Car06g01872 486 ProSiteProfiles SET domain profile. 64 292 IPR001214 GO:0005515
Car06g01872 486 PANTHER [FRUCTOSE-BISPHOSPHATE ALDOLASE]-LYSINE N-METHYLTRANSFERASE, CHLOROPLASTIC 35 477 - -
Car06g01872 486 SMART set_7 69 298 IPR001214 GO:0005515
Car06g01872 486 Gene3D set domain protein methyltransferase, domain 1 50 307 - -
Car06g01872 486 PIRSF RMT_SET 1 485 IPR011192 GO:0009507|GO:0030785
Car06g01872 486 SUPERFAMILY SET domain 50 312 IPR046341 -
Car06g01872 486 Gene3D - 308 465 IPR036464 -
Car06g01872 486 Pfam SET domain 81 291 IPR001214 GO:0005515
Car06g01872 486 SUPERFAMILY RuBisCo LSMT C-terminal, substrate-binding domain 315 479 IPR036464 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g01872 51 247 NAC Transcription Factor Family AT3G56570 28.155 1.12e-08 55.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Car06g01872 SET 2.4e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g01872 K00592 - ag:AAA69903 795.423