Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g01860 ATGGTTGGCGGTGGAAATGGTGAGGAACGACCGCCGTGGTCGATGGAGAGTGGTGGGACCCCTGTTGGGTTGAGTCCGGGTCCTATGACTCTTCTTTCCAACTTGTTTGGTGACAACGATGACTGCAAGTCGTTCTCTGACCTCCTTGCCGGCGCCATGCTGGATGTGGACCCCGGTGGCGGAAGAGGTGGTGGTGGCGGCTTGTCACCGGTAACCATGTTCACTGTTCCACCTCAGGGGCTAGCACAAGCCTACTCAAGTGTTGAAATTCAATCTGAACATCCATTTTCTATATCAGTAGTGCctactactactactactacCTCATTCACACAAGTTCCTGCAGAATCTGTTGATTACTTTCACTCAGAACAGAGATTACAACAGTCTTCTTCTGTGAATGTTGACAAGCCTAACGACGACGGCTACAACTGGAGGAAATATGGACAGAAACAGGTTAAAGGTTCTGAGTTTCCTAGAAGTTATTACAAGTGCACATATCCAAGCTGTCCAGTGAGGAAAAAAGTCGAATGCTCTCTCGATGGTCATGTAACTGCAATTATTTACAAAGGAGAGCACAATCATCAACGCCCTCATCCAAGCAAGCTCACAAATGATAATTCAAATGTTCAACAAGTTTCTTTAAGTTCTCACCAAATGTCGAAGATAGATTCAGATGCAACAGCTGAACATGTGTTGTTAGGAACAAGTGACACCGAGGATGAAGGAGATCGTGAAACTGAAACAGATGAGAAAAATTATGAACCTGATCTTAAGAGAAGAAACACAGAAGTTAGGCTGCTGGATCCAGCCCTTTCACAAAGGACAGTCTCAGAGCCTAGAATCATTGTACAGACAACAAGTGACGTGGATCTCTTAGAGGATGGATATAGATGGCGCAAATATGGGCAGAAAGTTGTCAAGGGCAATCCTTATCCAAGGAGCTATTACAAATGCACAACCCCAGGTTGCAAAGTTCGGAAGCATGTTGAGAGGGCTTCAACGGATCGTAAAGCTGTCATGACAACATATGAAGGAAAGCATAATCACGACGTACCAGCAGCTAAGACTAATAGCCATACCCTTGCCAGCAATAATAGTGCCTCACAGCTAAAATCACAAAATGCCCTACCCGAGATGAATAATATCAACAGAAGGGGTCAGCAGCAGCCTTTAGCAGTAGCACGTCTAAGGCTGAAGGAATAA 1206 0.4461 MVGGGNGEERPPWSMESGGTPVGLSPGPMTLLSNLFGDNDDCKSFSDLLAGAMLDVDPGGGRGGGGGLSPVTMFTVPPQGLAQAYSSVEIQSEHPFSISVVPTTTTTTSFTQVPAESVDYFHSEQRLQQSSSVNVDKPNDDGYNWRKYGQKQVKGSEFPRSYYKCTYPSCPVRKKVECSLDGHVTAIIYKGEHNHQRPHPSKLTNDNSNVQQVSLSSHQMSKIDSDATAEHVLLGTSDTEDEGDRETETDEKNYEPDLKRRNTEVRLLDPALSQRTVSEPRIIVQTTSDVDLLEDGYRWRKYGQKVVKGNPYPRSYYKCTTPGCKVRKHVERASTDRKAVMTTYEGKHNHDVPAAKTNSHTLASNNSASQLKSQNALPEMNNINRRGQQQPLAVARLRLKE 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g01860 401 MobiDBLite consensus disorder prediction 201 222 - -
Car06g01860 401 SUPERFAMILY WRKY DNA-binding domain 285 353 IPR036576 GO:0003700|GO:0006355|GO:0043565
Car06g01860 401 PANTHER WRKY TRANSCRIPTION FACTOR 58-RELATED 80 401 - -
Car06g01860 401 SMART WRKY_cls 139 197 IPR003657 GO:0003700|GO:0006355|GO:0043565
Car06g01860 401 SMART WRKY_cls 293 352 IPR003657 GO:0003700|GO:0006355|GO:0043565
Car06g01860 401 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 80 401 IPR044810 GO:0003700
Car06g01860 401 MobiDBLite consensus disorder prediction 194 222 - -
Car06g01860 401 ProSiteProfiles WRKY domain profile. 139 198 IPR003657 GO:0003700|GO:0006355|GO:0043565
Car06g01860 401 Pfam WRKY DNA -binding domain 140 196 IPR003657 GO:0003700|GO:0006355|GO:0043565
Car06g01860 401 Pfam WRKY DNA -binding domain 294 351 IPR003657 GO:0003700|GO:0006355|GO:0043565
Car06g01860 401 Gene3D WRKY domain 278 354 IPR036576 GO:0003700|GO:0006355|GO:0043565
Car06g01860 401 Gene3D WRKY domain 124 199 IPR036576 GO:0003700|GO:0006355|GO:0043565
Car06g01860 401 SUPERFAMILY WRKY DNA-binding domain 138 198 IPR036576 GO:0003700|GO:0006355|GO:0043565
Car06g01860 401 ProSiteProfiles WRKY domain profile. 288 353 IPR003657 GO:0003700|GO:0006355|GO:0043565
Car06g01860 401 MobiDBLite consensus disorder prediction 1 26 - -
Car06g01860 401 MobiDBLite consensus disorder prediction 234 256 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g01860 Car-Chr6 18504608 18507863 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g01860 17 401 WRKY Transcription Factor Family AT2G03340 46.154 8.57e-118 350
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Car06g01860 WRKY 1.3e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g01860 - - gmx:100127369 457.218