Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g01845 ATGGTTGCTTTGTTTTCCCTGGCATTGCCGAAATTCAAGGTCGTCGCTGAAGCTGACGCATTTCCTTCCTTTCTTCCCAAAGACGTCAACAGAATCAAAGACCCATTTGCTCGAAGCCTCGCTACGCGGATTCAGAGACTTCCCGTATCCGTTAAGTTCTCTGAAAATCCCATCATGAGTAGTTGTGTGAAGCCACTGATGCAGAACAAGGCAAATCCAGTTGTCCTTTTACATGGTTTTGACAGCTCATGCTTAGAATGGAGATACACGTATCCATTGCTTGAGGAAGCTGGTCTTGAGACATGGGCCATTGACATTCTTGGTTGGGGTTTCTCTGATCTAGCGAAGCTTCCTTCATGTGATGTGGTATCAAAGCGTGAACACTTTTATCAGTTTTGGAAGTCCTACATCAAAAGGGCGATGATATTGGTTGGTCCAAGCCTTGGTTCTGCTGTTGCCATCGACTTTGCAGTCAATTATCCAGAAGCTGTGGAAAAGCTTGTTTTGATTGATGCTAGTGTATATGCTGAAGGAACAGGAAACCTAGCAACCTTACCAAGAGCGATAGCCTATGCTGGGGTATATTTATTAAAGAGCATCCCTATACGCATATATGCAAACTATTTGTCATTCACTAACATATCTTTCAGCACCAGCCTTGATTGGACAAATATTGGCCGCTTGCATTGTTTATTGCCTTGGTGGGAGGATGCCGCGGTTAATTTTATGATTAGTGGTGGCTACAATGTTGCTTCCCAGATAAAAATGGTAAAGCAGAAAACACTCATAATTTGGGGGGAGAATGACCAAATAATCAGCAATAAGCTTGCAGTGCGACTGCACTGTGAATTACCTGAGTCAATTATACGCCAAATACCCGATTGTGGTCATCTTCCTCATGTTGAAAGACCGGATTCCGTTGTCAAATTGATTGAAGAATTTGTTCAAAAGGATACCAAGACAGTAAATCAATGTGTTCCATCATTATGA 990 0.4253 MVALFSLALPKFKVVAEADAFPSFLPKDVNRIKDPFARSLATRIQRLPVSVKFSENPIMSSCVKPLMQNKANPVVLLHGFDSSCLEWRYTYPLLEEAGLETWAIDILGWGFSDLAKLPSCDVVSKREHFYQFWKSYIKRAMILVGPSLGSAVAIDFAVNYPEAVEKLVLIDASVYAEGTGNLATLPRAIAYAGVYLLKSIPIRIYANYLSFTNISFSTSLDWTNIGRLHCLLPWWEDAAVNFMISGGYNVASQIKMVKQKTLIIWGENDQIISNKLAVRLHCELPESIIRQIPDCGHLPHVERPDSVVKLIEEFVQKDTKTVNQCVPSL 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g01845 329 SUPERFAMILY alpha/beta-Hydrolases 71 316 IPR029058 -
Car06g01845 329 Pfam Alpha/beta hydrolase family 74 309 IPR000073 -
Car06g01845 329 PANTHER HYDROLASE 8 327 - -
Car06g01845 329 PANTHER ALPHA/BETA FOLD HYDROLASE 8 327 - -
Car06g01845 329 Gene3D alpha/beta hydrolase 64 323 IPR029058 -
Car06g01845 329 PRINTS Epoxide hydrolase signature 78 96 IPR000639 GO:0003824
Car06g01845 329 PRINTS Epoxide hydrolase signature 98 113 IPR000639 GO:0003824
Car06g01845 329 PRINTS Epoxide hydrolase signature 157 170 IPR000639 GO:0003824
Car06g01845 329 PRINTS Epoxide hydrolase signature 292 314 IPR000639 GO:0003824
Car06g01845 329 PRINTS Alpha/beta hydrolase fold signature 98 113 IPR000073 -
Car06g01845 329 PRINTS Alpha/beta hydrolase fold signature 143 156 IPR000073 -
Car06g01845 329 PRINTS Alpha/beta hydrolase fold signature 157 170 IPR000073 -
Car06g01845 329 PRINTS Alpha/beta hydrolase fold signature 261 275 IPR000073 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g01845 Car-Chr6 18296852 18301483 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g01845 73 315 Acyl Lipid Metabolism Gene Families AT3G10840 20.952 5.92e-10 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g01845 - - mtr:MTR_4g083080 625.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g01845 06 18296852 18301483 Car06g01845 06 18296852 18301483 ECH
Car06g01845 06 18296852 18301483 Car02g00833 02 12056021 12060501 PCT