Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g01831 ATGTCGTCTTCCGAATCAGGCCGTAGAGTGAGTAGCTGTCGAATTGTGGTAGAAAATCAAACCGCATCACCGCCACCTTCTATTCCTACGACAAATATGCAAAGGGTTGGAATTAAGCCACTTTCAGGAAAGCCATACTTCCATGCAATCATTTTGAAAACACATCTTAGTCCCCGCTTCACATTGGGGCCGTCTAGCAAAATATGCTCAAAACTTCCTTCTGGTGCGGCGGTTCCTACTGTTCTAAACTATCACGGTAAGAGCTGGGACATGATTTATAATGGACAAAAAAAAGCCAAGCAGTTTGATACCTTTGGCTGGAGAAAATTTGCTAAAGATAATTGTGTGAAGGTTGGAGACGCGTGCGTTTTTGAGCTCATGGAAAGCAAAGAGAAAATCATATTCGAAGTTCAAATTCTTAGAGGTGACTTCCCATGCGAGTTTCCTGGAATTAATGAGAGTGAAGAAGAGCCAATTGTTTTATCTGAATTAATCGGGACTGGTGAGAGTGAAGCGCCATTTGTCATCGACTAG 534 0.4251 MSSSESGRRVSSCRIVVENQTASPPPSIPTTNMQRVGIKPLSGKPYFHAIILKTHLSPRFTLGPSSKICSKLPSGAAVPTVLNYHGKSWDMIYNGQKKAKQFDTFGWRKFAKDNCVKVGDACVFELMESKEKIIFEVQILRGDFPCEFPGINESEEEPIVLSELIGTGESEAPFVID 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g01831 177 SUPERFAMILY DNA-binding pseudobarrel domain 43 141 IPR015300 -
Car06g01831 177 Gene3D - 34 143 IPR015300 -
Car06g01831 177 SMART B3_2 47 143 IPR003340 GO:0003677
Car06g01831 177 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS04G0386900 24 154 - -
Car06g01831 177 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS11G0197600-RELATED 24 154 IPR044837 -
Car06g01831 177 ProSiteProfiles B3 DNA-binding domain profile. 80 143 IPR003340 GO:0003677
Car06g01831 177 CDD B3_DNA 45 141 IPR003340 GO:0003677
Car06g01831 177 Pfam B3 DNA binding domain 80 138 IPR003340 GO:0003677
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g01831 45 143 B3 DNA Binding Superfamily AT5G58280 28.000 6.14e-07 46.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Car06g01831 B3 7.5e-12 CL0405