Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g01829 ATGGAGTTTGGGATTGAAGCGGTGGGAACCATAGACAACTGTTTCGCATCCCTTCCCTTACCTCTAATCCAAACTCTTCACTCCACACGTTCATCTCCACTTCCTCCAATTCTCGCTCTCGAGCTTCGTTCTTCCACTCAATCCTGGTTCGTTGCTTGGTCCGGTGCCACTTCTTCTTCTCCTTCATCCATTCAGGTTTCTCAACTATTTGCCGATTGCATTTCCTTGCCGATTCATTCTCCCGTTCAAGTTAAAGTTGCTTCTAACATTCCCCATGCTTCTTCCGTTTCTGTTGAGCCACACACCGAGGACGATTGGGAGATTTTGGAACTTAATTCAGAACAAGCTGAAGCTCAAATTCTCAACCAGGTTAGGATTGTTCATGAAGGGATGAGGTTTCCTTTGCGGTTGCATGGTCACACTGTCATTACATTCCAAGTTGTTTCTGTTTTTCCCAAGAATGCGGTGGCAGGAGATTCACATCTAGGCTCCTATAGTAAAGAGAATACTGCAAAGATGCTGCTCCGTTTACAAGATCCAAATGGGTTATGTCGGACTAGTACTCATGTCAAAGGTGTTGAGTTTCACGTAGGGCTTACTTCTGTTGCTTTTGTTCATCCAGAAACAGCCAATCGCTTCTCATTTAACATGCTTCAGTTGGTTTCCATAGTGCCAAGAGTATCCAAAGAGAAAGTTAATATATCCAGAACCAATATTATGAAAGCCAAAAGTGGTTCGGCTGAGAATGGAGATACTGGCAAGAAGGAACCTCGACAGGCAGTTGTTCATCTGCTGACTTCAGAATCTGTGGCTAAAGGACATGTAATGCTAGCTAAGTCTCTTCGCCTTTATTTGAGAGCTAGCCTGCATTCATGGGTTTATTTGAAGGCGTGTGATGTTGTTTTAGAAAAAAATATTCCTTCCATTTCTCTTTGTCCTTGTCGATTCAAACTGTTATCGCAGAAGAATGCTGTTGAGAAAGATAGTCTAGATGATTTTCACGACCACAAGAATTACATCGACGAGAAATTGCATGCAAAACCTGCTTCAGGTGTCTTTTTGGATACCATAAATTGGTCTATCCACAGTGAAGTTGTTGCGGCTCTTTCTGATGAATCCAGTTACAGAGCAGAAGAAGAGGTTGCAAACCCGTCTCAGAATCAAAAGGGATTACAAAGTCTTGTACGACTATGGTATATTGCGCAGCTTGAGGCAATTACTTCCATTGCAGGGATGGAAGTTAATTCATTGGCTATGGGTAGTAAAACCTTGCTTCATTTTGAATTAAGCTGTTACAAGATTGGGAAGGATGAGAAGCTTCAGCTGGCTTCTTTAGAAAACAGTGGCAAGGCAGCTGAAATGTTATTTCTCATGACCTTTGGTGACGAAGATCTGCATCAAGGGAAACTTAATGCATATAAAGTTTCTTTTGGTGGAAGACTCGATAACACCAACATTGAGGATCTGAAGCTTTTTGAAAGAATGAAATTGGGTGATCCCGTTTCTATTCATTCTATGGAAGAGAGAGCCTCTGAAGACCACATTAGTTCAAATATCTCTTTCCTCGATCCCATGGAGAAAACTGCTTCTGATGTTATCAATAGGATGTTGGTATTGCTATCTTCAGCATGTGGTTTGTGGTTTGGCTCATGCAACCTACCACTTCCTGGGCATGTTCTTATATATGGACCCTCAGGCTCTGGGAAAACCATACTAGCAAGGAATGTGGCAAAATCCCTCGAGAATCATGAAGACATCTTAGCACACGTAATTTTTGTTTCTTGCTCAAAACTTGCTTTGGAGAAGGTGCCAATTATTCGCCAAGAACTTGCAAACCATATAACTGAAGCTTTAAACCATGCACCTTCTGTTGTCATCTTTGATGATCTTGATAGTATAATTTCTACCCCTGATTCCGAAGGATCTCAGCCATCAATGTCTGTTGCTGGACTCACAGATTTTCTGGTTGACATCATGGATGAATATGGGGAGAAGAGGCGAAAATCATGTGGATTCGGACCAATAGCTTTCATAGCTTCCATACAGTCCCTAGAGAACATACCACAATCTTTGAGCTCTTCAGGACGGTTTGACTTTCACATTAAGCTGCCTGCTCCTGCAGCTTCTGAGCGCAGGGATATGTTGAAACATGAAATACAAAGGCGGCACCTGCAATGCGATGATGACATCCTGCTTGATGTGGCTGGAAAATGTGATGGTTATGATGGCTATGATCTGGAAATATTAGTTGACAGAACTGTCCATGCCGCTGTTCGCCGTTTTCTGCCATCTAATGCCATTTATGAGCACGAGGGTCCTGCCTTACTACAAGAGGATTTTTCTCAGGCAATGCATGATTTTCTTCCAGTTGCAATGCGTGACATCACAAAATCTGTTTCTGATGATGGCCGCTCTGGATGGGATGATGTCGGTGGTCTTGTTGATATTCGAAATTCTATTAAAGAGATGATAGAGTTGCCATCAAAGTTTCCAAAAACTTTTGCACGAGCCCCGTTGAGGTTGCGGTCAAATATCCTTTTATATGGTCCTCCTGGTTGTGGCAAAACTCACATCGTtggtgctgctgctgctgcttctTCGCTTCGATTCATATCAGTAAAAGGGCCAGAACTGTTAAACAAATACATTGGTGCTTCAGAACAAGCTGTTAGGGATATATTTTCTAAAGCAGCTGCTGCAGCACCATGCCTACTGTTTTTTGATGAATTTGATTCTATTGCTCCCAAGAGAGGGCATGACAATACTGGAGTAACTGATCGAGTTGTCAATCAATTTTTGACTGAGTTAGACGGTGTTGAGATTTTAGCTGGTGTATTTGTGTTTGCTGCAACCAGTAGACCTGATTTACTTGACGCGGCACTGTTGAGACCGGGTAGGTTGGATCGTCTTCTATTTTGTGACTTCCCATCCTGGCAAGAGAGATTCGAAATTCTTACGGTACTTTCTAGAAAGTTACCAATGGCCAATGATATTGATTTGGCTACAGTAGCTAATATTACTGAGGGATTCAGTGGAGCTGATCTCCAAGCTCTCCTCTCAGATGCGCAGCTTGCAGCAGTTCATGATATTCTGGACAATATTGATGCGTCTAGGTCAGACAAAACACCAGTTATTACTGATTCTCTTCTAAAGTTGACTGCATCCAAGGCCAGACCATCTGTTTCAGAGGAAGAGAAAAGACGACTCTACAGTATTTATCGCCAGTTCCTGGATTCAAAGAGATCTGTTGCTGCTCAGTCAAGGGATGCAAAAGGCAAGAAGGCAACTCTAGCGTGA 3297 0.4222 MEFGIEAVGTIDNCFASLPLPLIQTLHSTRSSPLPPILALELRSSTQSWFVAWSGATSSSPSSIQVSQLFADCISLPIHSPVQVKVASNIPHASSVSVEPHTEDDWEILELNSEQAEAQILNQVRIVHEGMRFPLRLHGHTVITFQVVSVFPKNAVAGDSHLGSYSKENTAKMLLRLQDPNGLCRTSTHVKGVEFHVGLTSVAFVHPETANRFSFNMLQLVSIVPRVSKEKVNISRTNIMKAKSGSAENGDTGKKEPRQAVVHLLTSESVAKGHVMLAKSLRLYLRASLHSWVYLKACDVVLEKNIPSISLCPCRFKLLSQKNAVEKDSLDDFHDHKNYIDEKLHAKPASGVFLDTINWSIHSEVVAALSDESSYRAEEEVANPSQNQKGLQSLVRLWYIAQLEAITSIAGMEVNSLAMGSKTLLHFELSCYKIGKDEKLQLASLENSGKAAEMLFLMTFGDEDLHQGKLNAYKVSFGGRLDNTNIEDLKLFERMKLGDPVSIHSMEERASEDHISSNISFLDPMEKTASDVINRMLVLLSSACGLWFGSCNLPLPGHVLIYGPSGSGKTILARNVAKSLENHEDILAHVIFVSCSKLALEKVPIIRQELANHITEALNHAPSVVIFDDLDSIISTPDSEGSQPSMSVAGLTDFLVDIMDEYGEKRRKSCGFGPIAFIASIQSLENIPQSLSSSGRFDFHIKLPAPAASERRDMLKHEIQRRHLQCDDDILLDVAGKCDGYDGYDLEILVDRTVHAAVRRFLPSNAIYEHEGPALLQEDFSQAMHDFLPVAMRDITKSVSDDGRSGWDDVGGLVDIRNSIKEMIELPSKFPKTFARAPLRLRSNILLYGPPGCGKTHIVGAAAAASSLRFISVKGPELLNKYIGASEQAVRDIFSKAAAAAPCLLFFDEFDSIAPKRGHDNTGVTDRVVNQFLTELDGVEILAGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSWQERFEILTVLSRKLPMANDIDLATVANITEGFSGADLQALLSDAQLAAVHDILDNIDASRSDKTPVITDSLLKLTASKARPSVSEEEKRRLYSIYRQFLDSKRSVAAQSRDAKGKKATLA 1098
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g01829 1098 Gene3D - 91 174 - -
Car06g01829 1098 PANTHER AAA-FAMILY ATPASE 8 1095 - -
Car06g01829 1098 ProSitePatterns AAA-protein family signature. 945 963 IPR003960 GO:0005524|GO:0016887
Car06g01829 1098 Gene3D - 806 1068 IPR027417 -
Car06g01829 1098 Pfam ATPase family associated with various cellular activities (AAA) 845 972 IPR003959 GO:0005524|GO:0016887
Car06g01829 1098 Pfam ATPase family associated with various cellular activities (AAA) 559 704 IPR003959 GO:0005524|GO:0016887
Car06g01829 1098 SUPERFAMILY ADC-like 10 86 IPR009010 -
Car06g01829 1098 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 540 784 IPR027417 -
Car06g01829 1098 Gene3D - 517 706 IPR027417 -
Car06g01829 1098 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 807 1068 IPR027417 -
Car06g01829 1098 Gene3D - 976 1055 - -
Car06g01829 1098 SMART AAA_5 841 977 IPR003593 -
Car06g01829 1098 SMART AAA_5 555 707 IPR003593 -
Car06g01829 1098 Pfam AAA+ lid domain 997 1035 IPR041569 -
Car06g01829 1098 CDD AAA 836 974 - -
Car06g01829 1098 PANTHER - 8 1095 - -
Car06g01829 1098 Gene3D - 707 799 - -
Car06g01829 1098 SUPERFAMILY Cdc48 domain 2-like 91 156 IPR029067 -
Car06g01829 1098 Pfam Peroxisome biogenesis factor 1, N-terminal 95 156 IPR015342 GO:0005524|GO:0005777|GO:0007031
Car06g01829 1098 CDD AAA 553 704 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g01829 Car-Chr6 18144829 18157924 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g01829 556 762 Calmodulin-binding Proteins AT3G56690 28.708 1.18e-11 67.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g01829 K13338 - gmx:100803882 1782.3