Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g01826 ATGAAAGAGGTTAGTGGAGGAGGAGGTAGGAAACAAGGTGCAGCCTCACCATGTGCTGCATGCAAGCTTCTAAGAAGAAGATGTGCTCAAGATTGTGTTTTTGCTCCTTATTTCCCTGCAGATGAGCCTCACAAATTTGCTAATGTTCACAAAGTCTTTGGTGCTAGCAATGTTAACAAGATGCTTCAGGACTTACCTGAACATCAAAGAGGGGATGCAGTGAGTAGCATGGTGTATGAGGCAAATGCAAGAGTGAGAGATCCTGTGTATGGGTGTGTAGGTGCCATTTCATCACTTCAGCAACAAATTGATGTGTTACAAACCCAATTGGCTGTGGCACAAGCTGAAGCAGTGCACCTAAGGGTGCGCCAAACTGCATCATTTTGGAACAACTCAGGACATAGCCCAACCTATAGTGGTTCTCCATCATCCAACAAAATCAATGATTCACAACCCAAAAATATTTTTGATATGGACATGGTGGTGGACCAAGCTGGCTATGCTGATTCAATCTGGTGA 519 0.4412 MKEVSGGGGRKQGAASPCAACKLLRRRCAQDCVFAPYFPADEPHKFANVHKVFGASNVNKMLQDLPEHQRGDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDVLQTQLAVAQAEAVHLRVRQTASFWNNSGHSPTYSGSPSSNKINDSQPKNIFDMDMVVDQAGYADSIW 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g01826 172 Coils Coil 96 116 - -
Car06g01826 172 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 9 162 - -
Car06g01826 172 ProSiteProfiles LOB domain profile. 16 117 IPR004883 -
Car06g01826 172 PANTHER LOB DOMAIN-CONTAINING PROTEIN 3 9 162 - -
Car06g01826 172 Pfam Lateral organ boundaries (LOB) domain 17 114 IPR004883 -
Car06g01826 172 MobiDBLite consensus disorder prediction 131 152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g01826 Car-Chr6 18131339 18134740 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g01826 1 172 AS2 family AT1G31320 72.881 9.03e-74 217
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Car06g01826 LOB 7.8e-44 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g01826 - - gmx:100306560 275.404