Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g01812 ATGGCAAGAGGATTGAAAGTGCTATCAGCCCTAGATTCAGCGAAAACACAATACTATCACTTCAAAGCCATAATAATTGCCGGTATGGGACTTTTCACAGATTCATACGACCTGTTCTCGATCACACTCATCACAAGGATGCTCGGAAGAATATATTACTCCGACGACCAGAACATCCAACAAGTCAACCCTGTTGTGGTCTCCGCCCTGATCTCGGTGGCGCTGTTAGGAACGGCGTTCGGTCAACTCATATTCGGGCGACTGGGAGACCTAAAAGGGCGTCGACACGTGTACGGTATAGCCTTATTATTGATGCTAACAAGCTCTTTAGCTTCAGGATTCTCCATTTGTATAACAAAGAGAGTTTGTGTTTTACTCTCACTTGGTTTCTTTAGATTCTTCTTAGGACTTGGAATTGGTGGTGATTATCCTTTATCTTCAACCATTATGTCTGAGTTTGCTAATAAAAGGACAAGAGGGTCTTTTATAGCGGCAGTATTTTCTATGCAAGGGTTTGGTATATTGGCTAGTGCAATGGTTACTATGGTGGTTTGTTCGGTGTTTCGCCGCGCTTGGAAGCCTTCTTCGCCTTTCGATGTGCCGCCGGAGGCTGACGTTGCATGGAGGTTGATATTGATGATAGGTTGTATTCCGGCAGCCATGACTTATTATTGGCGTATGATGATGCCTGAAACTGCCAGGTATACAGCATTAGTAGAACAAAATGTGTTGCAAGCTGCAAAAGACATGGAAAAAGTACTAGATGTTTCAATGAGCCAAATAGCAGAAGAAGATCCATTACCAGAACCAACAACAAATCCATACCCTCTTTTTTCAAGAGAATTCTTGCGTCGACACGGTCGTGATCTTTTCGCCTGTTCTTCCAATTGGTTTCTCTTAGACATAGTGTTCTACAGCCAAGTTCTATTCCAAAGTGAAATATACAAAAGACACCTCAAACCCAAAGACAAAGAAGATGTGTATCAAGAAGCTTACTATCTTGCAAGAATCCAAGCCATTATTGCTGTTTGTTCCACAATTCCTGGCTACTTCTTCACTGTCTACTTCATCGATCGCATCGGACGAGTCAAGATTCAAATGATGGGTTTTTTCTTCATGGCTGTCTCGTTTTTTGCAATAGGCTTTCCTTATTATTCTCATTGGACTACTGATGAAAAAGAAGATGATAAAGGGTTTATGGTTCTTTATGCTAGGTTTAGGTCAACTTGTCATGGCATTTCTGGGGCTGTTGGTAAGGTTGGAGCAATCATTGGATCTGTTGGATTTTTATGGGCTTCACATAGAGAGAAGGAGGAAGAGTATCCAAAGGGAATTGGAATGAAAGCTTCCCTTATTATACTTGGAGGTGTTTGCATAGTGGGAATGGTTGTTACTTACTTCTTCACTAAGGAAACTATGGGAAGGTCTTTGGAAGAGAATGAGATTGAGTCTCATCAAGCGGATGAAGAATACAACAATCTTTGA 1485 0.4162 MARGLKVLSALDSAKTQYYHFKAIIIAGMGLFTDSYDLFSITLITRMLGRIYYSDDQNIQQVNPVVVSALISVALLGTAFGQLIFGRLGDLKGRRHVYGIALLLMLTSSLASGFSICITKRVCVLLSLGFFRFFLGLGIGGDYPLSSTIMSEFANKRTRGSFIAAVFSMQGFGILASAMVTMVVCSVFRRAWKPSSPFDVPPEADVAWRLILMIGCIPAAMTYYWRMMMPETARYTALVEQNVLQAAKDMEKVLDVSMSQIAEEDPLPEPTTNPYPLFSREFLRRHGRDLFACSSNWFLLDIVFYSQVLFQSEIYKRHLKPKDKEDVYQEAYYLARIQAIIAVCSTIPGYFFTVYFIDRIGRVKIQMMGFFFMAVSFFAIGFPYYSHWTTDEKEDDKGFMVLYARFRSTCHGISGAVGKVGAIIGSVGFLWASHREKEEEYPKGIGMKASLIILGGVCIVGMVVTYFFTKETMGRSLEENEIESHQADEEYNNL 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g01812 494 ProSiteProfiles Major facilitator superfamily (MFS) profile. 23 494 IPR020846 GO:0022857
Car06g01812 494 PANTHER INORGANIC PHOSPHATE TRANSPORTER 1-9-RELATED 5 483 - -
Car06g01812 494 Coils Coil 477 494 - -
Car06g01812 494 SUPERFAMILY MFS general substrate transporter 11 481 IPR036259 -
Car06g01812 494 Pfam Sugar (and other) transporter 25 393 IPR005828 GO:0016021|GO:0022857|GO:0055085
Car06g01812 494 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 5 483 - -
Car06g01812 494 ProSitePatterns Sugar transport proteins signature 2. 134 159 IPR005829 GO:0016021|GO:0022857|GO:0055085
Car06g01812 494 Gene3D MFS general substrate transporter like domains 19 494 IPR036259 -
Car06g01812 494 CDD MFS_PhT 24 472 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g01812 Car-Chr6 17973311 17977589 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g01812 5 483 Inorganic Solute Cotransporters AT1G76430 59.029 0.0 610
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g01812 K08176 - gmx:100803834 727.628