Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g01787 ATGGAGGACATTCTAGGTCTTATCAGACTTCGTATCAAAAGAGCCACAAATCTCATACCTCGCGATTCTCGTACCAGTGACCCATATGTTCTTATCACCATGGCAGAACAGACACTGAAGACTGGTGTTGTGAAAGATAACTGCAATCCTGAATGGAAGGAAGAATTGACACTTTATGTTAAGGATATTAACACACCAATAAACCTGACAGTTTGCGACAAAGACACTTTCACTGTGGACGACAAAATGGGCGATGCTGACATAGACATTAAACCATATCTTCAGTGTGTGAAGATGGGTTTGTCTGATCTCCCTGACGGACATGTAATTAAGATGGTTCAACCTGATAGGACTAACTGCCTAGCCGAAGAGAGTAGCTGCATATGGAGAAATGGGAAAGTTGTCCAAGAAATGAGTTTAAGATTGAGAAATGTTAAGTCTGGTGAAGTACTCGTCGAAATTGAGTGGATTGATGTTCCAAATTCCAACGGCTTATCCGCGGTCGAGTTTTAG 513 0.4172 MEDILGLIRLRIKRATNLIPRDSRTSDPYVLITMAEQTLKTGVVKDNCNPEWKEELTLYVKDINTPINLTVCDKDTFTVDDKMGDADIDIKPYLQCVKMGLSDLPDGHVIKMVQPDRTNCLAEESSCIWRNGKVVQEMSLRLRNVKSGEVLVEIEWIDVPNSNGLSAVEF 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g01787 170 SMART C2_3c 7 102 IPR000008 -
Car06g01787 170 Gene3D C2 domain 4 167 IPR035892 -
Car06g01787 170 PANTHER CALCIUM-DEPENDENT LIPID-BINDING (CALB DOMAIN) FAMILY PROTEIN 1 170 - -
Car06g01787 170 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 4 158 IPR035892 -
Car06g01787 170 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 1 170 IPR044562 -
Car06g01787 170 Pfam C2 domain 7 92 IPR000008 -
Car06g01787 170 ProSiteProfiles C2 domain profile. 1 103 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g01787 Car-Chr6 17738635 17740026 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g01787 39 166 C2H2 Transcription Factor Family AT1G70790 57.692 3.47e-49 154
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g01787 - - gmx:100781585 286.574