Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g01779 ATGGATTCTAATACTTGCACCATGCATTCACATTGTGTACAAATGACTATGGAAATACACCAAGTTGTTCCACCACCCCACAAAAGCACTTTACAAAAACTTAAAGTTAGACTCAAGGAAACTTTTTTCCCTGATGATCCTCTTCGCCAATTCAAAGGACAAACATTTAAGATAAAATTAATCTTAGGAGCTAAATACATGTTCCCTATTCTTCAATGGGGTCCTAATTATAGCTTCAAGCTCTTTAAATCTGATCTTGTTTCTGGTCTCACTATTGCTAGCTTAGCCATCCCACAGGGAATCAGTTATGCCAAACTTGCAAATCTTCCTCCAATTGTAGGACTGTATTCTAGTTTTGTTCCTCCACTTATTTATGCTGTTCTTGGAAGCTCAAGGGACCTAGCTGTAGGACCTGTTTCTATTGCTTCTCTTGTTTTAGGATCTATGCTTAGACAAGAAGTGTCTCCCTCAGCAGATCCTGTTCTGTTTCTTCAACTTGCTCTTACTGCAACTTTATTTGCTGGTCTATTTCAAGCTTCTCTGGGAATTCTAAGGTTAGGATTCATCATTGATTTTTTATCAAAGGCAATCCTAATTGGGTTCATGGCTGGAGCTGCTATAATTGTATCTCTACAACAACTGAAGAGTCTCCTTGGAATCACACATTTCACTAAACAAATGGGACTTATTCCTGTTATGAGTTCTGTTTTTCACAATATACATGAGTGGTCATGGCAAACAATAGTGATGGGAATTTGCTTCTTGGTGCTACTTCTAATAGCAAGACACGTTAGCATAAGAAAACCAAAGCTATTCTGGGTCTCTGCTGGAGCTCCTCTTATGTGTGTCATAATCTCTACTGTCCTGGCTTTTGCAATCAAGGCTCAAAATCATGGCATCAGTGTAATTGGGAAATTACATGAAGGAATAAATCCTTTTTCATGGAATATGTTGTGGTTTCATGGAAGTCACCGAGGTCTAGTCATGAAAACTGGGCTTATCACTGGCATTTTGTCCCTCACTGAAGGTATTGCAGTAGGGAGGACTTTTGCAGCTCTGGGACAGTACAAAGTGGATGGAAATAAGGAAATGATGGCAATTGGGTTTATGAACGTGGTTGGCTCCTTCACTTCCTGCTATGTTACAACAGGCGCTTTCTCTCGTTCAGCTGTTAATAACAACGCAGGAGCGAAAACCGCAGCTTCAAATATAGTAATGTCTGTGACAGTCATGGTGACACTCCTTTTTCTTATGCCATTGTTCCAATACACACCTAATGTTGTATTGGGAGCAATCATAGTCACAGCAGTGATTGGCCTCATTGATATCCCTTCTGCTTGTCACATTTGGAAGATAGACAAATTCGACTTCCTTGTGATGTTAACTGCTTTCTTGGGTGTTATTTTGTTCTCAGTCCAGGAAGGCCTTGCTGTTGCAGTTGGGTTATCAACTTTTAGGATACTCCTGCAAATTACAAGGCCTAAAACAGTAATGATGGGTAACATTCCAGGGACAGACATATATAGAAATCTTCATCAATACAAGGAAGCTACAAGAATACCAGGCTTTCTTATTTTAAGCATTGAGGCTCCTATCAATTTTGCAAACATCACATATCTCAATGACAGGACACTACGATGGATTgaagaagaagaagaagaTAACATAAAGGAACTGTCGAGCCTTCGATTTTTAATCCTGGAAATGTCAGCTGTGAGCGCCATTGACACAAGTGGAATCTCCCTTTTCAAGGAGTTAAAGGCAACAATGGAAAAGAAGGGCATTGAGCTTGTGTTGGTGAATCCTCTTGCCGAGGTCATAGAAAAGCTGAAAAAAGCAGATGAAGCTAATAATTTCATTCGAGCAGACAACCTATTCTTGACAGTTGGAGAGGCTGTGGCTTCCCTTTCGTCAACAATGAAGAGCCAATCAACCACAACAGAAGAAGCACAAACAATTGTGCCACATTACTGA 1974 0.3972 MDSNTCTMHSHCVQMTMEIHQVVPPPHKSTLQKLKVRLKETFFPDDPLRQFKGQTFKIKLILGAKYMFPILQWGPNYSFKLFKSDLVSGLTIASLAIPQGISYAKLANLPPIVGLYSSFVPPLIYAVLGSSRDLAVGPVSIASLVLGSMLRQEVSPSADPVLFLQLALTATLFAGLFQASLGILRLGFIIDFLSKAILIGFMAGAAIIVSLQQLKSLLGITHFTKQMGLIPVMSSVFHNIHEWSWQTIVMGICFLVLLLIARHVSIRKPKLFWVSAGAPLMCVIISTVLAFAIKAQNHGISVIGKLHEGINPFSWNMLWFHGSHRGLVMKTGLITGILSLTEGIAVGRTFAALGQYKVDGNKEMMAIGFMNVVGSFTSCYVTTGAFSRSAVNNNAGAKTAASNIVMSVTVMVTLLFLMPLFQYTPNVVLGAIIVTAVIGLIDIPSACHIWKIDKFDFLVMLTAFLGVILFSVQEGLAVAVGLSTFRILLQITRPKTVMMGNIPGTDIYRNLHQYKEATRIPGFLILSIEAPINFANITYLNDRTLRWIEEEEEDNIKELSSLRFLILEMSAVSAIDTSGISLFKELKATMEKKGIELVLVNPLAEVIEKLKKADEANNFIRADNLFLTVGEAVASLSSTMKSQSTTTEEAQTIVPHY 657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g01779 657 ProSitePatterns SLC26A transporters signature. 111 132 IPR018045 GO:0008271|GO:0008272
Car06g01779 657 PANTHER SULFATE TRANSPORTER 18 638 IPR001902 GO:0015301|GO:0016020|GO:0055085
Car06g01779 657 ProSiteProfiles STAS domain profile. 513 636 IPR002645 -
Car06g01779 657 PANTHER BNAA09G30120D PROTEIN 18 638 IPR030313 -
Car06g01779 657 TIGRFAM sulP: sulfate permease 69 632 IPR001902 GO:0015301|GO:0016020|GO:0055085
Car06g01779 657 SUPERFAMILY SpoIIaa-like 518 636 IPR036513 -
Car06g01779 657 Pfam Sulfate permease family 82 462 IPR011547 GO:0016021
Car06g01779 657 Gene3D STAS domain 493 639 IPR036513 -
Car06g01779 657 CDD STAS_SulP_like_sulfate_transporter 514 629 - -
Car06g01779 657 Pfam STAS domain 514 632 IPR002645 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g01779 Car-Chr6 17654575 17660880 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g01779 14 643 Inorganic Solute Cotransporters AT3G15990 65.457 0.0 832
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g01779 K17471 - gmx:100787284 1128.24
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g01779 06 17654575 17660880 Car06g01779 06 17654575 17660880 ECH