Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g01761 ATGACACTAATCAATTCCCTTTCCTTTTCACTCTTAGCAATAATAACATTTGCTTTCTTACTTCACTCTCAATCAACAATTCTACCTCAAGACCATGTAGCAACTTCAGAAAGTGAAGCACTAGAGTTAACAAAAACAGAAAGAGAAACACTAGAAATCATCATAGGGGTCGGCGGTGGAGGCACTGGTTAttcccctgctccttccccttccgctgactgtccacttccaccaccacctccccctgactgtccaccaccacctcctccgcctccCCTTACCCGTTTAGAAAAAGCAAAAACAGTACTTCTCAACTTCAAAAGCCAAATCTACGACTCAACTGGCTACACTAATAACTGGAAGAAAAGCGCATCCGTTTGCAACTTCAACGGAATCCTCTGCGACACTTTCCCAAACACAATCGAACAAGCCGTTGCTGGGTTAGACTTAAACCAAGCAAGGTTATCAGGTTCAATCCCAAAACAAATCACTAACTACCTTTATTTCTACGAACTTGACCTTAGTAACAATAATCTCATCGGTGAGTTTCCAAACGAAGTTATTCAATCAAAACAACTTGTTTTTTTAGACTTAAGGTTTAACCATCTTTACGGTTCAATTCCATCACAATTGTTTGAAAAGGACCTTGACGTAATTTTCATAAACAATAACCAGTTCACTCAATGTTTACCTGAAAATTTCGGTTCTACCCCTGCAAGGTACTTAACATTCGCTCATAACCAATTCACCGGTCAAATTCCTAAAAGTATTGGTAACGCTTTCAAAACATTAACCGAAGTTCTTTTCTTAGGGAATAAATTTGAAGGGTGTTTACCTTTTGAAATTGGGTATCTTAAAAAAGCAACGGTTTTTGATGTTAGTCAGAATTTATTAACCGGTCCTATTCCAGCTTCATTCGGTTGTTTGGAGAAAATTCAGTTTTTGAATTTGGCAAGTAATAAATTCTACGGTACTGTTCCTGAGAGTGTTTGTGTTCTTCCTGGGATACGTAACAATGGGAATTTGTCTTTGTCGGATAACTATTTCACTTCAATTGGACCAGCATGTTGGAGTTTGATTAAGTATAGGATATTGGATGTTAGTAAAAATTGTATCCCTGGCATTCCAAATCAAAGATCTCCGAGAGAGTGTTATGAGTTTCAGTGTAAGAAGAAGGCTTGTTCGAATCATGAGAGTTTGAGTTATGTTCCTTGTAAGACACATTGGGGGAACAAACAGAGTAATGCCCCTGTTTCTCAAGAAATGGCTGCAGAGCCTGTGACTTATAAGTCTCTTAAACCGCATCGGTTGAGATTGAGATGA 1323 0.3515 MTLINSLSFSLLAIITFAFLLHSQSTILPQDHVATSESEALELTKTERETLEIIIGVGGGGTGYSPAPSPSADCPLPPPPPPDCPPPPPPPPLTRLEKAKTVLLNFKSQIYDSTGYTNNWKKSASVCNFNGILCDTFPNTIEQAVAGLDLNQARLSGSIPKQITNYLYFYELDLSNNNLIGEFPNEVIQSKQLVFLDLRFNHLYGSIPSQLFEKDLDVIFINNNQFTQCLPENFGSTPARYLTFAHNQFTGQIPKSIGNAFKTLTEVLFLGNKFEGCLPFEIGYLKKATVFDVSQNLLTGPIPASFGCLEKIQFLNLASNKFYGTVPESVCVLPGIRNNGNLSLSDNYFTSIGPACWSLIKYRILDVSKNCIPGIPNQRSPRECYEFQCKKKACSNHESLSYVPCKTHWGNKQSNAPVSQEMAAEPVTYKSLKPHRLRLR 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g01761 440 PANTHER BNAC05G26270D PROTEIN 155 433 - -
Car06g01761 440 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 155 433 - -
Car06g01761 440 Gene3D Ribonuclease Inhibitor 266 419 IPR032675 -
Car06g01761 440 Gene3D Ribonuclease Inhibitor 98 214 IPR032675 -
Car06g01761 440 Gene3D Ribonuclease Inhibitor 215 265 IPR032675 -
Car06g01761 440 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 34 157 - -
Car06g01761 440 PANTHER BNAC05G26270D PROTEIN 34 157 - -
Car06g01761 440 Pfam Leucine rich repeat N-terminal domain 99 135 IPR013210 -
Car06g01761 440 MobiDBLite consensus disorder prediction 70 93 - -
Car06g01761 440 MobiDBLite consensus disorder prediction 65 93 - -
Car06g01761 440 SUPERFAMILY L domain-like 98 372 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g01761 Car-Chr6 17431077 17432489 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g01761 96 396 Leucine-rich Repeat extension Gene Families AT1G62440 39.640 1.01e-68 231
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g01761 - - cam:101512430 790.415
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g01761 06 17431077 17432489 Car06g01761 06 17431077 17432489 ECH