Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g01760 ATGCTTTCATCAAAACAAACTCTACTTTCAATTTCACTCATCACCCTCCTTCTTAGTCTCCTGTTGGTAAATTCCAATTCCCTGACCATTGAAATCCCTCCAATCCCATTAATCCCCGACATCTTAAACTTCATAGACCTAAGACTCGCTATAATTTTCCCAATAATCCAAACCTTCAAAAACACAATAACCTCAGACCCATTAGGAATAACCACAACATGGGTTGGTCCAAATATATGCAACTACAAAGGCTTCTATTGTGACAATCCACCTGACAATCTAACAGCCACCACCGTCGCCTCCATCGATTTCAACGGCTTCCACCTCGCCGCACCATCTCTCGACGGCTTCATTGATCAACTTCCGGATTTAGCTCTTTTCCATGCTAACTCCAACAATTTCTCTGGCACCATTTCATCAAAACTAGCATCACTAAAATATCTATATGAATTAGATCTAAGTAACAATTTTCTTTCCGGAACATTTCCCATTTCAATCCTAAACATACCAACACTCTCCTTTTTAGACATTAGGTACAATCTCTTCACAGGAACAGTGCCTCAACAAATTTTCACACAAACATTAGATGCAATTTTCCTCAACAACAACAATTTTATTCTAACACTTCCCGATAATTTAGGCGATACGAAAGCATCTTACATAACATTAGCTAACAATAAATTCACCGGAGCAATTCCTAGTACAATTGGAAAAGCATCTTCCAATTTAATCGAAGTTTTATTATTAAACAACCTTTTAGACGGTTGTCTACCTTACGAAATAGGATTTCTAGAAAACGTTAAACTTTTTGACGCCGGTAGTAACCGTTTAACAGGACCGTTACCGTTTTCGTTTGGGTGTTTGAAGAATGTGGAGCAGTTAAACTTTGCTAGCAACATGTTGTACGGTCAGGTTCCGGAAGTGGTTTGTGCGTTAGGGAATTTGGCGAATTTATCTTTATCTTATAATTATTTTAATAGAGTGGGGCCCATTTGTAAGAAGCTTATAAGAAGTGGTGTGGTTGATGTGAGGAATAACTGTATTTTGGATGTTCCAGATCAGAGACCGTTGAAAGAGTGTGTGGCGTTTTATTCAGTTCCGAGAACTTGTTTGCGTTCTCGAACGTTTAGTATTATACCGTGTCACACTCCTAAAGCTAGGGAGATAAATAAGAGGAATTTGTTGTCTTATTCTGCTCTTCAGAGAAATAGATTACTTCTGTAA 1224 0.3815 MLSSKQTLLSISLITLLLSLLLVNSNSLTIEIPPIPLIPDILNFIDLRLAIIFPIIQTFKNTITSDPLGITTTWVGPNICNYKGFYCDNPPDNLTATTVASIDFNGFHLAAPSLDGFIDQLPDLALFHANSNNFSGTISSKLASLKYLYELDLSNNFLSGTFPISILNIPTLSFLDIRYNLFTGTVPQQIFTQTLDAIFLNNNNFILTLPDNLGDTKASYITLANNKFTGAIPSTIGKASSNLIEVLLLNNLLDGCLPYEIGFLENVKLFDAGSNRLTGPLPFSFGCLKNVEQLNFASNMLYGQVPEVVCALGNLANLSLSYNYFNRVGPICKKLIRSGVVDVRNNCILDVPDQRPLKECVAFYSVPRTCLRSRTFSIIPCHTPKAREINKRNLLSYSALQRNRLLL 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g01760 407 SUPERFAMILY L domain-like 59 353 - -
Car06g01760 407 Gene3D Ribonuclease Inhibitor 55 193 IPR032675 -
Car06g01760 407 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 13 402 - -
Car06g01760 407 Gene3D Ribonuclease Inhibitor 194 405 IPR032675 -
Car06g01760 407 PANTHER SCOPOLETIN GLUCOSYLTRANSFERASE 13 402 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g01760 Car-Chr6 17426585 17428004 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g01760 44 367 Leucine-rich Repeat extension Gene Families AT3G24480 46.296 4.73e-94 289
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g01760 - - gmx:100813314 552.362
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g01760 06 17426585 17428004 Car06g01760 06 17426585 17428004 ECH