Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g01748 ATGGAAAAGTTGGAGCAAGTTCAATGTTTCGGCCGCAAGAAGAACGCGGTGGCTGTCACCTACTGCAAGCGCGGCCGTGGTTTGATCAAGATCAACGGTGCCCCCATCGAGTTGATTGAACCGGAGATCCTCCGATTCAAAGCATTCGAGCCCATCCTCTTGTTNNNNNNNNNNCATTCGATCCCATCCTCTTGTTGGGAAAGAGTCGTTTCGCCGGAGTAG 222 0.5 MEKLEQVQCFGRKKNAVAVTYCKRGRGLIKINGAPIELIEPEILRFKAFEPILLXXXXHSIPSSCWERVVSPE 73
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g01748 73 PANTHER - 3 55 - -
Car06g01748 73 Pfam Ribosomal protein S9/S16 11 56 IPR000754 GO:0003735|GO:0005840|GO:0006412
Car06g01748 73 Gene3D - 1 62 IPR014721 -
Car06g01748 73 PANTHER RIBOSOMAL PROTEIN S9 3 55 IPR000754 GO:0003735|GO:0005840|GO:0006412
Car06g01748 73 SUPERFAMILY Ribosomal protein S5 domain 2-like 6 56 IPR020568 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g01748 Car-Chr6 17309782 17310003 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g01748 5 54 Cytoplasmic Ribosomal Protein Gene Family AT3G04230 78.000 4.75e-25 89.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g01748 K02960 - gmx:100779794 97.8265