Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g01738 ATGCTCTTAAATTCTTTAACTTTTTCTTCTTTTTCCAACTCAACCATGTTCCTCTATGGATTTCCCTATTTGTTAGGATTGTTACATTTTCTTGGAATGCACCTTCCTCTTGTAATGGCTGATTGCCCTTTGAATTTTACTGCTTCAAACTTTACACTGGCGTCCTCTTTATGCTCTGACCAAAGTGAGCGAGGAAAATGTTGTCGCTACATTAATGCTAATATTGCAATTTCTGTTGCTCGTTTTGCTAATGCAACAAGCAACCTAGGGGTTCCTCTTAATTCCTCTGATGTCTGCCTCCAAACCATATCTCAGAACTTGCAACTTTATGGAGTTCCACAACTTGCAACAGTTTTCTGTGGATTCGGGACAAAAATTCCCGTTAATTATGAATGCAAGGGTCGAACTAGTGTCATGCAGATGCTGCAATCTCCCAGATTTGTGGAGGTCACAAAATATTGCAAAGTGCCACTTGGAAAGGAAAGTAAATGTAAGAAGTGCTTAAACGCCAGCATTGGTTATCTGCATCATTTAGGAATTGAAGATAATATTACATTGAGTACATGTCGTGATGCCACTTTTGCTGCACTAGCAAGCCAAGTTGATGAGATATATACCACTGATATTGCAAGTTGTTTCTTTGGGGTTCAAGGACTTCTCGGGCCTCCAGTTACAGCTGTTGCTTTTGTGACGCTCATAGTCTTGATAGTTCTAATTCGCCAAAAAAGCAGAGAGCTAGACGAGCCTAATAATTTTGGTAAACCCTGTTCAAAAACCCTACCTTCTATGGCAACATGGAAATTTCAGGAAGGCTCTTCATCTATGTTTCGGAAGTTCAACTTCAAAGAGATAAAGAAGGCAACAGAGGGGTTTAGCACCATTATTGGCCAAGGGGGATTTGGAATAGTATATAAAGCTCATTTTAGTGATGGCCAAGTTGCAGCAGTAAAGCGGATGAACAGAGTCTCAGAACAGGGAGAGGATGACTTCTGCAGAGAAATTGAGCTTCTTGCTCGGCTGCACCATCGGCATCTTGTTGCGTTAAGAGGCTTTTGCATCAATAAACAAGAGAGGTTTCTGTTGTATGAGTACATGGGAAATGGAAGCTTAAAAGATCATCTTCATTCCCCTGGTAAAACACCATTAAGTTGGCGAGCTAGAATCCAAATAGCCATTGATGTGGCTAATGCACTGGAGTACCTTCATTTCTATTGTGATCCTCCACTGTTTCACAGAGATATCAAGTCTAGCAACACTTTACTGGATGAGAACTTTGTTGCTAAGATAGCTGATTTTGGCCTTGCACAAGCTTCAAAAGATGGTTCGATATGCTTCGAACCTGTAAACAGTGAAATCTGGGGAACTCCGGGTTATATGGATCCGGAATATGTTGTTACTCAAGAGCTCACCGAGAAAAGCGATATATACAGTTTTGGGGTGTTACTACTGGAAATTGTGACAGGAAGAAGAGCTATTCAAGACAATAAGAATTTGGTAGAATGGGCCAAACCTTACATGGAATCAGAAACTAGATTATTAGAGCTAGTAGATCCCAATGTGAGGGAGTCTTTTGACTTAGATCAGCTTCAAACAGTAATTTCTATAATAGGATGGTGCACCCAAAGAGAAGGAAGGGCAAGACCTTCAATTAAACAAGTCCTTAGGCTTCTGTATGAGACATCAGAACCAATACACAGTGAGTTTCTACAAGCTGTTGAAGATGAAGAGAGTCAGGGAAATGAACAGAGAGGCAGAAGAAGCAAAGGGAAAATGCTCAGAAATGAAGGGAATTCTAACAGCGGGGATGGAAGATATCTTGCTTCATCTTCGAGTACATCTCGGTCGTATTGTAGCAGAAGCTTTTTACTAGAAAATGGGTCTCCACAGTCATCACCAAATATATTTTCAGTCTGA 1914 0.406 MLLNSLTFSSFSNSTMFLYGFPYLLGLLHFLGMHLPLVMADCPLNFTASNFTLASSLCSDQSERGKCCRYINANIAISVARFANATSNLGVPLNSSDVCLQTISQNLQLYGVPQLATVFCGFGTKIPVNYECKGRTSVMQMLQSPRFVEVTKYCKVPLGKESKCKKCLNASIGYLHHLGIEDNITLSTCRDATFAALASQVDEIYTTDIASCFFGVQGLLGPPVTAVAFVTLIVLIVLIRQKSRELDEPNNFGKPCSKTLPSMATWKFQEGSSSMFRKFNFKEIKKATEGFSTIIGQGGFGIVYKAHFSDGQVAAVKRMNRVSEQGEDDFCREIELLARLHHRHLVALRGFCINKQERFLLYEYMGNGSLKDHLHSPGKTPLSWRARIQIAIDVANALEYLHFYCDPPLFHRDIKSSNTLLDENFVAKIADFGLAQASKDGSICFEPVNSEIWGTPGYMDPEYVVTQELTEKSDIYSFGVLLLEIVTGRRAIQDNKNLVEWAKPYMESETRLLELVDPNVRESFDLDQLQTVISIIGWCTQREGRARPSIKQVLRLLYETSEPIHSEFLQAVEDEESQGNEQRGRRSKGKMLRNEGNSNSGDGRYLASSSSTSRSYCSRSFLLENGSPQSSPNIFSV 637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g01738 637 SUPERFAMILY Protein kinase-like (PK-like) 270 559 IPR011009 -
Car06g01738 637 Pfam Protein kinase domain 293 555 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car06g01738 637 MobiDBLite consensus disorder prediction 569 592 - -
Car06g01738 637 MobiDBLite consensus disorder prediction 569 611 - -
Car06g01738 637 PANTHER OS01G0750732 PROTEIN 223 637 - -
Car06g01738 637 PANTHER OS01G0750732 PROTEIN 23 221 - -
Car06g01738 637 ProSiteProfiles Protein kinase domain profile. 289 568 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car06g01738 637 Gene3D Transferase(Phosphotransferase) domain 1 365 583 - -
Car06g01738 637 PANTHER BNAC06G02630D PROTEIN 223 637 - -
Car06g01738 637 PANTHER BNAC06G02630D PROTEIN 23 221 - -
Car06g01738 637 CDD STKc_IRAK 295 557 - -
Car06g01738 637 Pfam SPARK 40 177 IPR043891 -
Car06g01738 637 Gene3D Phosphorylase Kinase; domain 1 257 364 - -
Car06g01738 637 MobiDBLite consensus disorder prediction 593 611 - -
Car06g01738 637 ProSitePatterns Serine/Threonine protein kinases active-site signature. 409 421 IPR008271 GO:0004672|GO:0006468
Car06g01738 637 SMART serkin_6 289 564 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car06g01738 637 ProSitePatterns Protein kinases ATP-binding region signature. 295 317 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g01738 Car-Chr6 17180733 17185872 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g01738 37 636 Receptor kinase-like Gene Family AT3G19300 56.308 0.0 704
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_URK-1 Car06g01738 Pkinase 5.8e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g01738 - - gmx:100807955 1032.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g01738 06 17180733 17185872 Car06g01738 06 17180733 17185872 ECH