Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g01732 ATGAGCTTCACTTGGGATGCAATGAGTGTGAAACCACCTGGAAATGTTAATCTAGTAAGTCAGTCCTCCATATACTCTCTCACTTTTGATGAGTTACAGAACACCATTGGTGGAATTGGTAAAGATTTTATTGGATCAATGAACATGGATGAACTCTTGAAAAACATATGGACAGTTGAAGAGACTCAGGCTTTGACTTCTTCAGCTGGTGGAGGTGGAGAAGTTGGAGAAGGACTTAACCCATGTGGTAATTTGCAAAGACAAGGTTCCTTAACATTGCCAAGGACACTTAGTCAGAAAAAAGTTGACGAGGTTTGGAGGGATTTGATGAAAGATAATAATGATGGGGCCAGAGATAATAGTGGTTCATATATGCCTCAAAGACAACCAACATTAGGAGAAGTGACATTGGAAGAGTTTTTGGTGAGAGCTGGTGTTGTGAGAGAAGATACTCCTCAGGCTCAACAAATTGAAAGACCAAATAATAATGGATGGTTTAGTGACTTTTCTAGATCAAACAATAACACCAATCTACTTGGCTTTCAACAACCAAATGGAAATAACGGTGATTTGAGTGACAATAACTTAGTTCCTAAACACCTTCCTCTTCATCAATCTCAAAGGCCGCCACCTCTTTTCCCAAAACCTACAAATGTAGCATTTGCTGCTCATATTCATTTGTTAAACAATGCTCAACTTGGTAACCCTGGCAGAAGGGGAGGGATGACTGGAGTTCAAGAGCATTCAATGAATGGTGTTGGAATGCTTGGTTTAGCTGCGGCAAATGTCACAGCTCCTGTTGCTTCTCCGGGAAGTAAAATGTCGCCGGATGAAATTGCAAAGCATAATGTAGATTCTTCTACACTGTCACCAGTTCCTTATGTAATCAACAGAGGGAGGAAATTTGGTTCTGTAGATAAAGTTGTTGAAAGGAGACAAAGGAGAATGATAAAGAATAGAGAATCAGCTGCTAGGTCACGGGCTCGCAAGCAGGCCTACACCGTTGAACTAGAGGCTGAAGTTGCAAAACTTAAGGAAGTAAACGAGGAATTGCAAAGAAAGCAGGCAGAGTTTGTGGAAATGCAGAAAAATAAGGAGGACCTGCTTAGGGCAAATAAAATAAAATACTTGAGAAGGACACTTACAGGTCCGTGGTAG 1158 0.4085 MSFTWDAMSVKPPGNVNLVSQSSIYSLTFDELQNTIGGIGKDFIGSMNMDELLKNIWTVEETQALTSSAGGGGEVGEGLNPCGNLQRQGSLTLPRTLSQKKVDEVWRDLMKDNNDGARDNSGSYMPQRQPTLGEVTLEEFLVRAGVVREDTPQAQQIERPNNNGWFSDFSRSNNNTNLLGFQQPNGNNGDLSDNNLVPKHLPLHQSQRPPPLFPKPTNVAFAAHIHLLNNAQLGNPGRRGGMTGVQEHSMNGVGMLGLAAANVTAPVASPGSKMSPDEIAKHNVDSSTLSPVPYVINRGRKFGSVDKVVERRQRRMIKNRESAARSRARKQAYTVELEAEVAKLKEVNEELQRKQAEFVEMQKNKEDLLRANKIKYLRRTLTGPW 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g01732 385 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 14 385 IPR043452 GO:0003700|GO:0045893
Car06g01732 385 SMART brlzneu 307 371 IPR004827 GO:0003700|GO:0006355
Car06g01732 385 Gene3D - 309 367 - -
Car06g01732 385 CDD bZIP_plant_BZIP46 311 365 - -
Car06g01732 385 Pfam bZIP transcription factor 311 364 IPR004827 GO:0003700|GO:0006355
Car06g01732 385 PANTHER ABSCISIC ACID-INSENSITIVE 5-LIKE PROTEIN 7 14 385 - -
Car06g01732 385 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 309 354 IPR004827 GO:0003700|GO:0006355
Car06g01732 385 SUPERFAMILY Leucine zipper domain 311 360 IPR046347 GO:0003700|GO:0006355
Car06g01732 385 Coils Coil 330 371 - -
Car06g01732 385 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 314 329 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g01732 Car-Chr6 17147239 17149174 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g01732 18 385 bZIP Transcription Factor Family AT4G34000 45.330 3.61e-97 295
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Car06g01732 bZIP_1 1.7e-11 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g01732 K14432 - gmx:100776600 466.848
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g01732 06 17147239 17149174 Car06g01732 06 17147239 17149174 ECH