Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g01723 ATGAATTACAATTACTCTTCCTCCTTCTCCTTTTCCCCCACCAACCTCACCACCGAACAAGAACTCTCCGTCATCGTTGCCGCCTTAACAAATGTCGTCTCTGGCTCCACCTCCGCATCAGCCAGTAATTCAGTACCCGAATTTCGCCTCCCGGATGCGGCCGTCGGAACTAGTAGCTTAGATAAATTAGTCCCAGCGGTGGCGAACACGGAAACGTGCCGAGAATGCAACATAGCAGGGTGTTTGGGATGCAATTTCTTTCCTGAAGAGAACAAGAAAAAACAAAAGAGAGTGAAGAAGAAATACAGAGGAGTGAGACAGAGGCCGTGGGGAAAATGGGCCGCCGAGATTCGCGACCCGAAACGCGCGGCCCGTGTTTGGCTCGGAACTTTTACCACGGCGGAGGAAGCCGCCAGAGCATATGATAATGCCGCCATTGAGTTCCGTGGGCCCAGGGCTAAGCTCAATTTTCCCCTTGTTGACGAATCACTTAATATGCAACACACAGAGGAAGCTCCGAAGGAGCATATTAAGGATGAGAATTCGAATCAGGGAATTCAAATTGAGAAAACGGTTGGATTTGGGaataataataataataataataataataTGAATTGTGACTTTTGGGATAGGATTGGGGAAGCTGATTTTCAGCAACTTATGAGGCTTATGGATTTTGGTGGAGAATCTTCTGATTCCATAACAGGGAACACTTTTAGTTCGTAA 729 0.4636 MNYNYSSSFSFSPTNLTTEQELSVIVAALTNVVSGSTSASASNSVPEFRLPDAAVGTSSLDKLVPAVANTETCRECNIAGCLGCNFFPEENKKKQKRVKKKYRGVRQRPWGKWAAEIRDPKRAARVWLGTFTTAEEAARAYDNAAIEFRGPRAKLNFPLVDESLNMQHTEEAPKEHIKDENSNQGIQIEKTVGFGNNNNNNNNNMNCDFWDRIGEADFQQLMRLMDFGGESSDSITGNTFSS 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g01723 242 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 10 237 - -
Car06g01723 242 ProSiteProfiles AP2/ERF domain profile. 101 158 IPR001471 GO:0003700|GO:0006355
Car06g01723 242 Pfam AP2 domain 101 150 IPR001471 GO:0003700|GO:0006355
Car06g01723 242 PRINTS Ethylene responsive element binding protein signature 102 113 IPR001471 GO:0003700|GO:0006355
Car06g01723 242 PRINTS Ethylene responsive element binding protein signature 124 140 IPR001471 GO:0003700|GO:0006355
Car06g01723 242 SMART rav1_2 101 164 IPR001471 GO:0003700|GO:0006355
Car06g01723 242 Gene3D AP2/ERF domain 100 160 IPR036955 GO:0003700|GO:0006355
Car06g01723 242 CDD AP2 102 158 IPR001471 GO:0003700|GO:0006355
Car06g01723 242 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF109 10 237 - -
Car06g01723 242 SUPERFAMILY DNA-binding domain 101 159 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g01723 Car-Chr6 17001848 17002883 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g01723 11 161 AP2-EREBP Transcription Factor Family AT4G34410 46.237 4.51e-39 134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Car06g01723 AP2 5.7e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g01723 - - gmx:100820426 285.034
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g01723 06 17001848 17002883 Car06g01723 06 17001848 17002883 ECH