Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g01702 ATGGGGGGTTGCACTTCCAAGCCACAGAAACCCAACCCATATGCTTTAAGAGAAACGGAAGGTGACCCTACACAAACTCCGAAGACCCCACTCACTCCCGACGCTGAAAATCACCGCCGGAAAGATGACGTCATCGCCGGAAAGAAGTCTCCGTTCTTCCCGTTCTACAGTCCAAGTCCAGCTCGTTTTATGAAGAAGTCTCCGTCGTCGACTCCGTCGAGTGGAGGGAGTCGGAGTGCGAGCTCGACGCCTAAGAGGTTTTTCCGGCGACCTTTTCCTCCGCCTTCTCCGGCGAAGCATATAAGGGCTGTTTTGGCTCGGAGGCAGGGGAAGAAAGAAGCTGCGGCGATACCGGAGGAGGCGGAGGAAGGTGCCGGAGATTTGGACAAGAGATTTGGATTCTCGAAGGATTTTACTAGTAGGCTTGAGGTTGGAGAAGAAGTGGGTAGGGGACATTTTGGGTATACTTGTTCTGCTAAGTTCAAGAAGGGTGAGTTTAAGGGTCAACAAGTGGCTGTAAAAGTTATCCCTAAAGCAAAGATGACAACAGCAATCGCGATTGAAGATGTAAGAAGGGAGGTGAAAATATTGCGAGCTCTGAACGGGCACAGCAATTTGGTACAATTCTATGATGCTTTTGAAGACCAAGAGAATGTCTACATTGTAATGGAGTTATGTGAAGGGGGGGAGCTATTAGATATGATACTATCAAGAGGAGGGAAATACTCAGAAGATGATGCAAAGGCTGTCATGGTACAAATACTAAATGTCGTTGCATTTTGTCATCTTCAGGGTGTGGTACACCGAGATCTTAAGCCTGAGAATTTTTTGTACTCTTCAAAGGATGAAAGTTCTGAGTTAAAAGCTATAGATTTTGGGTTATCGGATTTTGTTAGACCAGATGAAAGGCTTAATGACATTGTTGGAAGTGCATACTATGTCGCTCCTGAAGTTCTTCATAGATCTTACAGCACAGAGGCTGATGTGTGGAGTATAGGTGTGATAGCATATATTCTATTATGTGGTAGTCGCCCATTTTGGGCTCGAACGGAGTCGGGTATTTTTAGGGCAGTTTTGAAAGCTGATCCAGGTTTTGACGAAGCTCCCTGGCCATCCTTATCTTCAGAAGCAAAAGATTTTGTCAAACGCCTACTGAATAAGGACCCGCGGAAGCGAATATCTGCTGCTCAGGCTTTGAGTCATCCTTGGATACGTAATTACAATGATGTAAAAGTTCCACTTGATATTTTAATATTCAAGCTCATGAAGAATTATATGAAATCGTCATCCTTGCGTAAGGCTGCCTTAAGGGCCTTATCAAAGACATTAACTGCTGATGAACTCTATTATCTGAGGGAACAATTTGCACTGTTGGAACCAAGCAAAAATGGCAGCATATCGTTGGAGAACGTTAACAAGGCCTTGAAGAAATATGCAACAGATGCCATGAAAGAGTCTCGAATCACTGATTTTCTTTCCTCGCTTAGTTCATTACAGTATAGAAGGATGGATTTTGAAGAATTTTGTGCTGCTGCATTAAGTGTACATCAACTCGAAGCTCTTGATCGTTGGGAACAACATGCTCGCTGTGCATATGAACTTTTTGAAAAAGACGGAAACAGGGCTATTGTCATTGAAGAACTTGCTTCGGAACTTGGACTTGGTCCTTCTATCCCTGTTCATGTGGTTCTTCATGACTGGATACGTCACACCGATGGAAAGTTAAGCTTTCTCGGGTTCGCCAAATTATTGCACGGTGTATCTAGCCGAAGCCTTACAAAAGTTCAGCTATGA 1794 0.442 MGGCTSKPQKPNPYALRETEGDPTQTPKTPLTPDAENHRRKDDVIAGKKSPFFPFYSPSPARFMKKSPSSTPSSGGSRSASSTPKRFFRRPFPPPSPAKHIRAVLARRQGKKEAAAIPEEAEEGAGDLDKRFGFSKDFTSRLEVGEEVGRGHFGYTCSAKFKKGEFKGQQVAVKVIPKAKMTTAIAIEDVRREVKILRALNGHSNLVQFYDAFEDQENVYIVMELCEGGELLDMILSRGGKYSEDDAKAVMVQILNVVAFCHLQGVVHRDLKPENFLYSSKDESSELKAIDFGLSDFVRPDERLNDIVGSAYYVAPEVLHRSYSTEADVWSIGVIAYILLCGSRPFWARTESGIFRAVLKADPGFDEAPWPSLSSEAKDFVKRLLNKDPRKRISAAQALSHPWIRNYNDVKVPLDILIFKLMKNYMKSSSLRKAALRALSKTLTADELYYLREQFALLEPSKNGSISLENVNKALKKYATDAMKESRITDFLSSLSSLQYRRMDFEEFCAAALSVHQLEALDRWEQHARCAYELFEKDGNRAIVIEELASELGLGPSIPVHVVLHDWIRHTDGKLSFLGFAKLLHGVSSRSLTKVQL 597
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g01702 597 Gene3D Transferase(Phosphotransferase) domain 1 231 419 - -
Car06g01702 597 SMART serkin_6 142 404 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car06g01702 597 Pfam Protein kinase domain 143 404 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car06g01702 597 Gene3D - 429 583 - -
Car06g01702 597 PANTHER CDPK-RELATED KINASE 2 38 590 - -
Car06g01702 597 ProSitePatterns Protein kinases ATP-binding region signature. 148 174 IPR017441 GO:0005524
Car06g01702 597 MobiDBLite consensus disorder prediction 33 47 - -
Car06g01702 597 Gene3D Phosphorylase Kinase; domain 1 144 230 - -
Car06g01702 597 SUPERFAMILY EF-hand 435 585 IPR011992 -
Car06g01702 597 PANTHER SERINE/THREONINE-PROTEIN KINASE 38 590 - -
Car06g01702 597 MobiDBLite consensus disorder prediction 1 98 - -
Car06g01702 597 MobiDBLite consensus disorder prediction 63 84 - -
Car06g01702 597 ProSiteProfiles Protein kinase domain profile. 142 404 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car06g01702 597 ProSitePatterns Serine/Threonine protein kinases active-site signature. 266 278 IPR008271 GO:0004672|GO:0006468
Car06g01702 597 Gene3D - 421 513 - -
Car06g01702 597 CDD STKc_CAMK 143 403 - -
Car06g01702 597 SUPERFAMILY Protein kinase-like (PK-like) 138 437 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g01702 Car-Chr6 16792043 16796735 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g01702 1 592 EF-hand Containing Proteins AT3G50530 72.188 0.0 929
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Car06g01702 Pkinase 1.2e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g01702 K00924 - cam:101492337 1127.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g01702 06 16792043 16796735 Car06g01702 06 16792043 16796735 ECH