Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g01696 ATGGGTTCTCTTCCTTCCGAACTTACTTTAGATTTAAGACCAACTTTTCTTCCCAAAACCATCTCCGATTTCCTCTTAGACCTTTCCTCCATTCAACCTACCTCCGATAAACTCTCTAAACTCCACGATTTTCTCTCCCGATTAGAAGACGAACTCAAAAAGATCGACGCTTTCAAACGCGAACTCCCTCTATGCATGTTCCTCTTAAACGACGCAATTTTAGTTTTGAAGGAGGAATTGGAAAAATGCAGAGTTCAGAATTCTTTACCAGTTTTGGAAGAGTTTATTCCTTTGAAGAAAGAGATTGATCAGAGTGAGGAAAATAATAATGACGACGATGATAACAACAACAATGAATGCAGAGATAAGATGAATTGGATGAGTTCTGTTCAGTTATGGAACAACAACAACACAACTACTAATAATAATGCATCTGATCAAAAACATAATCATAATAAATTAGAAACCAAGAAAATGGAAGAGGAAGAGCAATCTGTGACTGTAGCCGAGGAGCCTATTTTTCAACCTTGTAGTAGTAATAGGAATGGAGGAAGTGCTTTTATGCCTTTCTCAACATACTCTTCTGTCCCTGTGACAACAGTGACATTAGCAGCACCTAAACAAGAGAAGGAAGACACTGTTATAAATAGATTATCACTTTTGACCCCTGGTATGAAAAGTTTGAGGGAAGGGTTTGGTTCGAGGGGATCGAGAGGCAGCTCTAGCAGGGCAGTTTCCTCCTCTCCTCCGACTGTGCATCCGAGTTTGCGAGCCGGGCCGCTTCAGCCGCAGCAGACTTCTAGGAAACAGAGGAGATGTTGGTCGCCTGAATTGCACCGGCGATTTGTCAGTGCGTTGCAGAAGCTTGGTGGTTCTCAAGCAGCAACGCCAAAGCAAATTAGAGAACTCATGCAAGTTGATGGCCTAACCAACGATGAAGTGAAGAGCCATTTGCAAGTGAGTTTTCGGTATTCTTTTATTCTCTTAACTTCATGCTTGGTTATGTGGTGTCTGGAGGAAGACACTGGTGTCGTGTAA 1038 0.42 MGSLPSELTLDLRPTFLPKTISDFLLDLSSIQPTSDKLSKLHDFLSRLEDELKKIDAFKRELPLCMFLLNDAILVLKEELEKCRVQNSLPVLEEFIPLKKEIDQSEENNNDDDDNNNNECRDKMNWMSSVQLWNNNNTTTNNNASDQKHNHNKLETKKMEEEEQSVTVAEEPIFQPCSSNRNGGSAFMPFSTYSSVPVTTVTLAAPKQEKEDTVINRLSLLTPGMKSLREGFGSRGSRGSSSRAVSSSPPTVHPSLRAGPLQPQQTSRKQRRCWSPELHRRFVSALQKLGGSQAATPKQIRELMQVDGLTNDEVKSHLQVSFRYSFILLTSCLVMWCLEEDTGVV 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g01696 345 Coils Coil 144 164 - -
Car06g01696 345 Pfam Myb-like DNA-binding domain 271 319 IPR001005 -
Car06g01696 345 Gene3D - 268 324 - -
Car06g01696 345 MobiDBLite consensus disorder prediction 234 271 - -
Car06g01696 345 PANTHER TRANSCRIPTION FACTOR HHO6 7 319 - -
Car06g01696 345 MobiDBLite consensus disorder prediction 226 273 - -
Car06g01696 345 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 266 326 IPR017930 -
Car06g01696 345 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 7 319 IPR044787 GO:0003700|GO:0006355
Car06g01696 345 SUPERFAMILY Homeodomain-like 266 322 IPR009057 -
Car06g01696 345 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 269 322 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g01696 Car-Chr6 16728802 16731564 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g01696 6 319 G2-like Transcription Factor Family AT2G03500 39.818 5.73e-54 181
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Car06g01696 Myb_DNA-binding 1.3e-05 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g01696 - - mtr:MTR_4g086835 441.039
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g01696 06 16728802 16731564 Car06g01696 06 16728802 16731564 ECH