Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g01678 AAGTTTGAGGGTTGCACTGAGAAGAAGAAGAACACATTTCCTCCCCCAGCTTCTAATGGCATCAGATAACAACCACTCACCGCCTCTTGAGATATTAGTTCGGCGGCCGGAAGAATTTTCCCTATGGACAGGACCTCCATTCCCCAATGGTCAGCCTAATGTCAAGCTTGATAAAGTTAATTGCTTGAATACAAAATTCAGTGATGATGGATCTCGGCTTATGGTGGTGAAATCAAACTGTGTGATTAGTATTTATGATTGCAAAAGTGCTCAAGAGATTAGGTCTTTTGAAGTTCCTAATCTTGTTGCTTCTGTCCTGTCGCCTTGTGGAACTTATTTGCAAACATTTCAAAAACCTTCTGGGCCGCAAGATAAGAACGTGACGCTATGGAAAACGGAGACCGGTGATCGCCTTTATCAACACTCCCAAAAGAACTTGACAAAAACCAATTGGCCTGTACTTCAATTCAGCTCCGATGAAACTACCGCATGTCGCCTGGCAACTAATGAGGTGCAATTTTTCGACACTGGGGATTTTTCTAAAGGATTTATTTATCGGTTAAGAGTTCCAGGAGTTGCTGCTGCTGAGCTTTCTAGTTCACCTGCTTCTCATGTAGCTGCATTTGTTCCGGAATCCAAGGGTGTTCCTGCTAGTGTACAGATATTTGCTTGTGGTGCTTCCCAAAGTCAACCTGTGGCTCGACGAAGTTTTTTCCGATGTTCTACCACCCAACTTAAATGGAATCATGGTTCAACTGGACTTCTAGTTGTGGTGCAGTCAGATGTTGATAAAACCAATCAGAGTTACTACGGAGAATCAAAGTTATACTACCTGACAACAGATGGGGTGCATGAAGGATTAGTGCCTCTTCGGAAAGATGGGCCTGTTCACGATGCTCAGTGGTCACATTCAGGCTTAGAATTTGCTGTTGTGTATGGGTTTATGCCTGCTAAAGCAACTCTATTTGACAAGAAGTGCAATCCTCTACTGGAGCTTGGAGCTGGCCCTTACAACACAATTCGATGGAACCCAAAAGGGAAATTTTTATGTTTGGCTGGCTTCGGTAACTTGCCTGGTGATATGGTATTTTGGGATTACGTAGATAAGAAACAACTTGGAACAACCAAGGCTGAATGGTCTGTGACAAGTGAATGGTCTCCAGATGGGTGCTATTTCATGACTGCGACAACGGCTCCAAGGCTTCAAGTTGACAATGGGATCAAGATTTTTCACTATAATGGGTCATTGTACTTCAAGAAGATGTTTGACAAGTTGTACCAGGTTGATTGGAAACCAGAGTCTCCCAGTAAGTTCGGTGATATCACTGAATTAATCAAGTCTTTAGACTCGATAAAACTTGAAGATAAGAAACCATCAGGTCAAGGACCAAAACCAACCCAGGCTTCTACAAAAGCCTCTTCTGCCAACCCCACTGCACAAAAACCTGCCGCATATCGTCCACCACATGCTAAGGCTGCGGCTGTTATTCAGGCAGAGTTGTTAGGAGAGAGCACGACAGAATCATTGAGCAAGAATGCTTTACgaaacaagaaaaagagagagaagcagaaagagaaaaagGCAGCTGCTGATTCCAGTTCTTCGTGA 1609 0.427 SLRVALRRRRTHFLPQLLMASDNNHSPPLEILVRRPEEFSLWTGPPFPNGQPNVKLDKVNCLNTKFSDDGSRLMVVKSNCVISIYDCKSAQEIRSFEVPNLVASVLSPCGTYLQTFQKPSGPQDKNVTLWKTETGDRLYQHSQKNLTKTNWPVLQFSSDETTACRLATNEVQFFDTGDFSKGFIYRLRVPGVAAAELSSSPASHVAAFVPESKGVPASVQIFACGASQSQPVARRSFFRCSTTQLKWNHGSTGLLVVVQSDVDKTNQSYYGESKLYYLTTDGVHEGLVPLRKDGPVHDAQWSHSGLEFAVVYGFMPAKATLFDKKCNPLLELGAGPYNTIRWNPKGKFLCLAGFGNLPGDMVFWDYVDKKQLGTTKAEWSVTSEWSPDGCYFMTATTAPRLQVDNGIKIFHYNGSLYFKKMFDKLYQVDWKPESPSKFGDITELIKSLDSIKLEDKKPSGQGPKPTQASTKASSANPTAQKPAAYRPPHAKAAAVIQAELLGESTTESLSKNALRNKKKREKQKEKKAAADSSSS 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g01678 535 MobiDBLite consensus disorder prediction 505 535 - -
Car06g01678 535 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2A 28 532 IPR011387 GO:0003743|GO:0006413
Car06g01678 535 MobiDBLite consensus disorder prediction 452 492 - -
Car06g01678 535 Gene3D - 39 222 IPR015943 GO:0005515
Car06g01678 535 SUPERFAMILY DPP6 N-terminal domain-like 61 429 - -
Car06g01678 535 Coils Coil 511 531 - -
Car06g01678 535 MobiDBLite consensus disorder prediction 462 480 - -
Car06g01678 535 PIRSF Transl_init_eIF2A 23 535 IPR011387 GO:0003743|GO:0006413
Car06g01678 535 Gene3D - 223 436 IPR015943 GO:0005515
Car06g01678 535 Pfam Eukaryotic translation initiation factor eIF2A 235 428 IPR013979 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g01678 Car-Chr6 16561324 16565818 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g01678 106 436 Eukaryotic Initiation Factors Gene Family AT5G27640 24.234 7.90e-24 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g01678 K15026 - gmx:100811589 894.804