Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g01677 ATGATGGGACATAAAAGGAGCCCTTGCTCTGTTGATCAAAGCAGTTATAATTCTATTGCATCTAAAAAGCAAAAGCCTGATTTAGAGATCACCACTAAGGATAGGAAGGAAAAGCTCGGTGAACGAATTGTCGCTCTTCAACAGCTTGTTTCACCATATGGAAAGACAGATACATCTTCTGTTTTAAAGGAGGCGATGGAATACATAGGGTTCCTTCATAAACAAGTTAAGCTGCTTAGTGCTCCTTACCTCGAAACTTCACCAGCAACTGAGATGCAGGGTACTGAGTCATGCAGCCTGAGAAGTAGAGGGTTATGTCTTGTTCCTGTGTCATTTACTATTGGAGTTGCTGAGGGAAATGGTGCAGATATCTGGGCACCAATCAAGACCAATTCACCTAAATATGAGAAAGATGTTTCACAATTTCAGTGA 432 0.412 MMGHKRSPCSVDQSSYNSIASKKQKPDLEITTKDRKEKLGERIVALQQLVSPYGKTDTSSVLKEAMEYIGFLHKQVKLLSAPYLETSPATEMQGTESCSLRSRGLCLVPVSFTIGVAEGNGADIWAPIKTNSPKYEKDVSQFQ 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g01677 143 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 1 123 - -
Car06g01677 143 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 33 88 IPR036638 GO:0046983
Car06g01677 143 CDD bHLH_AtbHLH_like 30 80 IPR045239 -
Car06g01677 143 MobiDBLite consensus disorder prediction 8 25 - -
Car06g01677 143 Gene3D - 21 91 IPR036638 GO:0046983
Car06g01677 143 MobiDBLite consensus disorder prediction 1 32 - -
Car06g01677 143 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 23 72 IPR011598 GO:0046983
Car06g01677 143 PANTHER TRANSCRIPTION FACTOR BHLH154 1 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g01677 Car-Chr6 16539848 16544068 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g01677 1 130 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31730 58.462 4.78e-48 150
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car06g01677 - - gmx:100809747 247.284